Cariama cristata (Red-legged seriema): 104165375
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Entry
104165375 CDS
T08341
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104165375 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccri01001
]
104165375 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccri04054
]
104165375 (CIITA)
Enzymes [BR:
ccri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104165375 (CIITA)
Protein kinases [BR:
ccri01001
]
Serine/threonine kinases: Other
TAF1 family
104165375 (CIITA)
Pattern recognition receptors [BR:
ccri04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104165375 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
LRR_14
Silic_transp
Motif
Other DBs
NCBI-GeneID:
104165375
NCBI-ProteinID:
XP_009703277
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
PVEVFCTSLMDYFRDVCKSVAMEREVTLDHLFIDGTLVQSQTETKTGKNSVKTMEKELVT
CSLQGKEKAALKRSQIFQIPGGKDLETKVIVVLGKESILVQKICQDWSNGEFSQFEFVFW
FDCKQISLPEKQYSLKDLLLEFVVKPQEGSKEIFEYILQNPAKVLLVFDGFEGLHDHENF
PRCSASQPEKDLCSIKELLSGLIQKKILNGCTLLLTARPKEKVYQYVSKVDKTIEIVGFS
PQQRELYITKYFEGLPYCDNALKLIKECEYLFSHCYSPVMCRFVCFLCETVLEMGGKSLP
STLTTVFLKFVQQKIIPMQTDVTAMQNQESLAMLAHVAWYLGEKHQSAMKSDLLHSKEVK
EFALKYGLLLPFAFPRHSDSGEGEFGSTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSF
PSKKKKPYNWLDLVPRFLAGLLFLQDDPYFCSLSNKDLKQSTKKQKILLKCIRRLQINEL
YPERLLELLHCIYETQSNYLLQHVALRLKPDLSFLGIVLTPPDVHVLHSILKRSRKEFSL
DLRNSSIDMQGLKDLVGLKNVTSFRASLSDTVRLWKSLEQTKDYELLRASTEKFVLDPFK
AKTMKDVSDLSDLVEMQKKMINCVQDASDCSSYEIPAIKNLRKLEFALGPVCGPQGFLKL
VEILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLRSLETLNLSQNKITDVGAEKLA
TALPSLSSLKTLSLYNNSICDFGAENLAKVLPAMASLRVLDVQYNKITGVGAQQLTDSLR
KCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
2441 nt
NT seq
+upstream
nt +downstream
nt
agccagtggaagttttctgtacgtcacttatggattatttccgagatgtgtgcaaatctg
tggccatggagcgtgaagtaactcttgatcacctgtttattgatgggacacttgttcaaa
gccaaactgaaaccaagactgggaagaatagtgtaaaaacaatggaaaaggagctggtga
cttgcagtctgcaagggaaggaaaaggcagcccttaaaagaagccaaatatttcaaatcc
caggaggtaaagacttagagactaaagtgattgtggtgctgggaaaagaaagcattcttg
ttcagaagatctgccaggactggtccaacggagagttttctcaatttgaatttgtatttt
ggtttgactgcaaacaaataagcttgcctgagaagcaatacagcctgaaggatctgcttc
ttgaatttgttgtgaaacctcaagagggaagcaaagagatctttgagtatatattgcaaa
atcctgctaaagtccttctggtttttgatgggtttgaagggttgcatgatcatgagaatt
ttcctcgttgctcagcaagccagcctgaaaaagacttgtgcagtataaaggagctgcttt
caggactcatccaaaaaaagatactcaatggttgtactttattacttacagcaagaccaa
aagagaaggtgtaccagtatgtgtccaaagtggataagactattgaaatagtaggatttt
cccctcagcagagagaattgtacataaccaaatacttcgaagggttaccctactgtgata
atgcactgaaattaatcaaagagtgtgagtacttgttcagtcattgttacagccctgtta
tgtgtagatttgtttgttttctctgtgagacagtacttgaaatgggaggcaaaagccttc
cttcaactcttactacagtcttcctgaaatttgttcagcaaaagataatacctatgcaaa
cagatgttacagccatgcaaaatcaagagagtcttgctatgctagcccatgtagcatggt
atcttggagaaaagcatcaaagtgccatgaaaagtgatcttcttcattctaaggaagtta
aagaatttgctctgaaatacggacttttgctgccatttgcattccccagacattcagata
gtggagaaggggaatttggaagcacattctctgattttgtcattcagaatttcttgggtg
cacttcaccttatgttagcagaagagatcaaggataaaagtctaacaaagtacctgtctt
ttccatccaagaagaaaaaaccttataactggttagatttagtacctcgatttttggctg
gattgttgttcctccaagatgacccctacttctgctccctttcaaataaggatctaaaac
aatcaaccaagaagcagaaaatactcttgaaatgtattagaaggctgcagataaatgagc
tctatccggagaggttacttgagcttttacattgtatttatgaaacacaaagcaattatc
ttttgcagcatgtggccttaaggctcaagccagacctgtcttttctgggcatagttctta
caccacctgatgtccatgtactgcactctattttaaaaaggtcaagaaaagagttttcct
tggatttacgaaacagcagcattgacatgcaaggcctaaaagacttggttggcctaaaga
atgtgacatcattcagggcttccctcagtgatacagtcaggctctggaaatctttagaac
agacaaaagactacgaactgttgagagcatcaacagagaaatttgttcttgatcccttta
aggcaaagacaatgaaggatgtcagtgatctttcagaccttgtagagatgcagaagaaga
tgatcaattgtgtgcaagatgcatctgattgcagcagctatgaaattcctgccatcaaaa
acctcagaaaactagaatttgcgctgggtccagtatgtggccctcagggattcctgaaac
tcgtggaaattcttgcagcatttccatcacttcagcatttagaccttgatgctctgagtg
aaaatggcataggagatgaaggagcaaagagtctatctgaagtctttccaaccctgagat
cactggaaactttaaacttatcgcagaataagataacagatgtgggtgcggagaaactag
ctacagctcttccttccttgtcttcattaaagacactaagcttgtacaataatagcattt
gtgactttggagcagaaaatcttgcgaaagttcttcctgcgatggcatctttaagagtgc
tagatgttcagtataacaaaataactggtgttggagcccagcagctgactgacagcctac
gaaaatgtcctcatataaagaacttggtgatgtggaatcccaccattccctatggagttc
ttgaacatcttcagcagctggactctcggatcagtgtgtag
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