Cariama cristata (Red-legged seriema): 104165500
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Entry
104165500 CDS
T08341
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104165500 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104165500 (MSH6)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104165500 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PWWP
Autoind_bind
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
104165500
NCBI-ProteinID:
XP_009703448
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MEGYPWWPCLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYVRPYKGSSDGET
LKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCNEPSDTEEEEEEEMEQMSESASG
NSDDCNSEEDVKSNKRVTSRESATKAKRRRVLDSDSDHDGSDIEFKPDVKEAASSEEASS
GVDENESTDTETDAESVAESPVKVPSKRKRREINKPAKRRSLENECSETPKRAVTVSLEA
KSKLTSFAAPESFESQANACSGGTSGFAVWEHEKLDWLQEGKKKDAHRKRQGDPDYDPCT
LYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGT
WAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREICR
IITKGTQTYSILDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDDR
HCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVL
LEEGYFKEKQSSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLID
QELLSLANFKEYVPVDIDTAKTTSSSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGT
LLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPD
LERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEE
VANDFKSKVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDY
DKALQDIKTVEEDLHKYLDKQRKLLGFKSVLYWGAGKNRYQMEIPESVVSRNLPEEYELK
STRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVL
DVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIG
SKDEDNSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRL
GASDRIMAGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAE
KIRCRTLFSTHYHSLVEDYSHNAAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKS
YGFNAARLANIPEEVIQKGHRKAKEFEKTTISLRIFRYLCLVVDGATSDAKAVQKLTAMI
NHL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgcctcatatacaaccatccgactgaaagaacaata
gtcagaggaaaagggaaatccactcgtgtccacgtacagttttttgatgacagccctaca
aggggctgggtcagtattaaatatgtgagaccatataaaggttcatcagatggggagaca
ctgaagggaggtatgttttatagtacaaagccagaaattaagagagcaatggtgctggcg
gatgatgcaatgagtaaagataaaactaagcggcttgaactggcagtatgcaacgaacct
tcagacacagaggaggaggaagaggaggaaatggagcagatgagtgaaagtgcatcgggc
aacagtgatgactgcaatagcgaggaggatgtgaagagtaataagcgagtaacgagcagg
gaaagtgccacaaaagccaaaagaaggagagttttggattccgacagtgatcatgatggc
tctgatatagagttcaagcctgatgtgaaagaagcggcaagcagcgaggaagcaagtagt
ggggtggatgaaaatgaatctaccgacacagaaacagatgcagagagtgttgcagaaagt
cccgtaaaagtcccttctaaacgaaagagaagagagataaacaagcctgctaaaaggaga
agcttagaaaatgaatgttctgaaacgcccaaaagagcggtaacagtttctttagaagct
aagtctaagctgacatcatttgcagcacctgaaagttttgaatctcaggcaaatgcttgc
agtggaggcaccagtggctttgcagtgtgggaacatgaaaagcttgactggctgcaggaa
gggaaaaagaaagatgcacacaggaaacggcagggtgacccggattacgacccatgtact
ctgtatgtaccggaggactatctcaacaagtgcacgccaggaatgcggcggtggtggcag
ctgaaaagccaaaactttgacgctgtgattttctacaaagttggaaaattctatgagttg
tatcatatggatgcagtcactggtgtaaatgagttgggcttgatctttatgaaaggtact
tgggcccattccggttttccagaaactgcgtttggcagattctctgatgttctagtgcag
aaaggttacaaggtagcccgtgttgagcaaacagaaactcctgaaatgatggaaacgcgc
tacaagtcaatggcccacccaacaaaatttgacaaggttgtacgccgagaaatatgcaga
atcatcaccaaaggaactcagacgtacagcattctggactgtgatccctctgagaaccat
aacaaataccttctgtgcgttaaggaaaaagaggactcctctggacaacgtgtttacggg
gtctgctttgttgacacatcagtggggaagttttatgtgggccagttctcagatgaccgg
cattgttcgaggtttaggactttagtagcgcattacactcctgtgcaggtactgtacgag
aaggggaacctgtctgtggacacccagaagatactgaagggctcccttgtttcttgcatt
caggaagggctgatctctggttcccagttctggaatgcatctaaaacactaaaagtcctt
cttgaggagggatatttcaaggagaaacagagctctgaaaacggatgttctctgccttct
gtaatcaaatctctgacttcagagagtgactcgctgggattaactccaggtgaaaacagt
gaattggctttgtcagcccttgggggatgtgtcttctatctcaaaaaatgtctgattgat
caggagcttctatcgctggcaaactttaaggagtacgtccctgtggatattgatactgca
aaaactacgagttcaagtagtttctttgccaaaactgaccagcggatggtgctggatggg
gtcactctgatgaacttggaagtcctgcagaacggaaccaatggaacgacagaaggtact
ttgttggaaaggatcgattcttgttgtacaccatttgggaagcgactcctgaagcagtgg
ctctgcgccccgctttgtaatcctaaatccatcaacgatcgtttagatgctgttgaggac
cttctggcagtgccagataaaatgtctgaggttagtgagcacctgaagaaacttcctgac
cttgaaaggctgctcagcaaaattcacagcattggatcaccactgaaaagtcagaaccat
cctgacagcagggccatcttttatgaagaaatcaaatacagcaaaaaaaagattgctgac
tttttgtctgcactggaggggtttaaagtaatgaatgaaattgtcgatgtcatggaagaa
gttgccaacgacttcaaatctaaagtccttaagcagctagtcacccgcaaagccaaaaat
cccgacggccgcttcccagacttgagtgcagagcttaaaagatgggataccgcttttgat
cataaccaggctcgaaagacaggagtgattactccaaaggcgggttttgaccccgattat
gataaagcactacaggatattaaaactgttgaggaagatcttcacaaatacctggataag
caacgcaaactgcttggattcaaatctgtgctgtactggggggcaggcaaaaatcggtac
caaatggaaataccggaaagtgtagtatcacgcaatttgcctgaggaatacgagttgaag
tcaaccaggaagggatataaacgttactggaccaaggagatcgagaagatgctggctgcg
atggttaatgctgaagagcgcagagatgcagcactaaaagactgtatgaggcgtttgttt
tacaactttgataaaaatagcaaagactggcagacagctgtggaatgcattgctgtgtta
gatgtcttgatgtcccttgctaactacagtcaagacggtgatggaccactgtgccgacct
gtaattctactgcctgtggatagtgctcctcccttcctggaacttaaaaattcacggcat
ccatgcattacaaaaactttctttggggatgattttattcctaatgacatcgtgataggc
agcaaagatgaagataacagtagtgaagcttcctgtgtcttagtaactggcccaaatatg
ggcggcaaatctacactcatgagacaggctggtctcctggttataatggctcaactggga
tgctacgtacctgctgaagtctgcaggcttacaccgattgacagagtatttacgaggctt
ggcgcctccgaccgaattatggcaggtgaaagtaccttctttgtcgaattgagtgagact
tccagcattctccagcatgcaacagagcattccctcgttcttgtggatgaactgggcaga
ggcacagctacttttgatggaactgctatagcgagcgcagttgtgaaagaacttgcagag
aaaatcaggtgtcggacgctgttctccacccactaccattccctggtagaggattactcc
cacaacgcggctgtgcggctcggtcacatggcgtgtatggtggaaaatgagagcgaagat
ccaagccaggaaacaattacgttcctgtataagttcattgaaggagcatgtccgaagagc
tacggcttcaatgcagcaaggcttgctaatattccagaggaagttatccagaaggggcac
agaaaagcaaaagagtttgaaaaaacaaccatttcactgagaatatttaggtatctgtgc
ctggtggtggatggggcaacaagcgatgcaaaggctgttcagaagcttactgcgatgatc
aaccatctttaa
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integrated database retrieval system
