Cariama cristata (Red-legged seriema): 104166067
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Entry
104166067 CDS
T08341
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04137
Mitophagy - animal
ccri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104166067 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104166067 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104166067 (VCP)
03009 Ribosome biogenesis [BR:
ccri03009
]
104166067 (VCP)
04131 Membrane trafficking [BR:
ccri04131
]
104166067 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccri04147
]
104166067 (VCP)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104166067 (VCP)
Ribosome biogenesis [BR:
ccri03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104166067 (VCP)
Membrane trafficking [BR:
ccri04131
]
SNARE
SNARE associated proteins
Others
104166067 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104166067 (VCP)
Exosome [BR:
ccri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104166067 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
104166067
NCBI-ProteinID:
XP_009704177
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
SKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRE
AVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGI
TGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEG
EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP
PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL
DAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE
VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK
MDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVK
RELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE
LLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILT
EMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPV
AKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD
PVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQG
TGGGSGGNAYNEDNDDDLYG
NT seq
2404 nt
NT seq
+upstream
nt +downstream
nt
ttctaaagcggatgacttatcgactgctattctgaagcagaagaacaggcccaatcggtt
aattgttgatgaagccatcaatgaagacaacagtgttgtgtcactgtctcaggcaaaaat
ggatgaattgcaactgttcagaggagacactgttctgctaaaaggaaagaagaggaggga
agcggtctgcattgttctgtcagatgacacctgctcagatgagaagattcgcatgaatag
ggttgttcgcaacaacctgagggtgcgcctgggtgatgtgatcagcatccagccttgccc
agatgtgaaatatggcaaacgtatccatgtgctaccaattgatgacacagtagaagggat
cacagggaatctctttgaggtctatctcaagccgtacttcctggaagcatacagacccat
caggaaaggtgacatcttcttggtgcgtggagggatgcgtgcagtggagttcaaagtggt
ggagacagatccaagtccgtactgcatagtggctccagacacagtgatccactgtgaagg
agagcccatcaaacgagaggatgaagaggagtcactgaatgaggtgggctatgatgacat
tggtggctgccggaagcaactggctcaaatcaaagagatggtggaacttcccctccgaca
ccctgcgctcttcaaggccataggggtgaagcctccacgtgggatcctgctgtacggtcc
tcctggcactggtaaaacgctgattgcccgagcagtggccaacgagacgggggctttctt
cttcctgatcaacggtcctgagattatgagcaagctggctggtgaatctgagagcaacct
gaggaaagcctttgaagaagcagagaagaacgctcctgccatcatcttcattgatgagct
ggatgccattgctcctaagagagagaagacacatggggaggtggaacgtcgcatagtctc
tcagctgttgactcttatggacggactgaaacagagagcgcatgtgatcgttatggcagc
taccaacagacctaacagcattgacccagcgctcaggcgattcggtcgttttgacagaga
ggtagatatcggtatcccagatgccactgggcgcctggagatcctgcagatccacacaaa
aaatatgaaactggctgatgatgtagatctcgaacaggtggcaaacgagacccatggcca
tgttggtgctgacttggctgctctttgctcagaagctgctcttcaagctatcagaaagaa
gatggatctcatagacctagaagatgaaaccatcgatgctgaagtgatgaactcgctggc
tgtgaccatggatgacttcaggtgggctctgagccagagtaacccttctgctcttcggga
gactgtggtggaggtgccacaagttacctgggaagatattggtggtctagaagatgtaaa
gagagagctccaggagcttgtacagtatcctgtggagcacccagacaagttcctcaaatt
tggtatgaccccatcgaaaggggttctgttctacgggccgcctggttgtggtaagacact
gctggccaaagccattgccaacgaatgccaagcaaacttcatttccatcaaggggccgga
attgcttaccatgtggtttggcgaatctgaagccaatgtgcgcgagatctttgacaaggc
ccgccaagcagccccttgtgtgctcttctttgatgagctggactccatcgcaaaggctcg
aggtgggaatatcggcgacggtggtggtgctgcagaccgcgtcatcaaccagatcctaac
agagatggatggcatgtccaccaagaagaatgtcttcatcattggtgccaccaacaggcc
agacatcattgacccagccatcttgcgccctggccgtcttgatcagctcatctacatccc
cctgcctgatgagaagtcccgggttgctattcttaaggccaacctgaggaaatcaccagt
tgccaaggatgttgacctggatttcctagctaagatgaccaatgggttttcgggggccga
cctgacagaaatttgccagcgtgcctgcaaactggccatccgcgagtccatcgagagtga
gatcaggcgagaacgcgagaggcagaccaacccttctgccatggaagtggaggaggatga
cccagttcccgagatacgcagggatcactttgaggaggccatgcgctttgctcgccgctc
cgtcagtgacaacgacatcaggaaatatgagatgtttgcacagactctacagcagagccg
tggctttggcagcttcaggttcccatcaggtaaccagggcggtgctggtccgagccaagg
cacaggaggtggcagcgggggcaacgcgtataatgaagacaacgatgatgacctctacgg
ttaa
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integrated database retrieval system
