Cariama cristata (Red-legged seriema): 104166295
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Entry
104166295 CDS
T08341
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccri03036
]
104166295 (CHD5)
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104166295 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
104166295
NCBI-ProteinID:
XP_009704473
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
ALLGPKRSTRQTVAFIGTGSNDEMSDNEEELEDKSESEGSDYSPNKKKKKKLKDRKEKKP
KRKKKDEEEDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPL
IAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSPAGPAPAIAAAVETVTVAPPLAASPP
QSALPTIIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSS
EEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQ
GGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEE
DDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRI
LHWAWKEPPAAPLPPMLPTPDAELALPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQL
ELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEW
MMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKHLYWNHRELMLGE
DTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWL
RFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMW
APDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITI
DQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLN
FLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVE
LSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPN
GSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFAQMTKMLDLLEDFLEYEGYKYERID
GGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAF
SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDD
ILKFGTEELFKDDVEGMVSQGQRITMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDN
KDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVER
EIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELS
DNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNA
RQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETF
ADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPDSKKSSEIVSSD
PNTPIPASPAHMHTGAMALADKIETQLGFQEEKDQVEQKSRKVSDSQVPASAEKVESEEH
PEGCDGKEKPREEKQEESEKAEPSPEPLVKDEGIQEKDKPLEKPELNNSPGKGEDKEVKQ
EDSKVEEKEQSEAQQNGDKEEEEDEKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAI
SSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNK
FLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESL
AGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLAPRG
SSPSLPPQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVT
NT seq
5719 nt
NT seq
+upstream
nt +downstream
nt
gctctcttgggacccaagcgttccacccggcagacggtagcgttcattgggacgggaagc
aatgatgaaatgtcagacaatgaagaggagcttgaggacaaatctgagagtgaagggagt
gactactcccccaacaaaaagaagaagaaaaaactgaaggacaggaaggagaaaaagcca
aaacggaagaagaaggatgaagaggaagatgacaacgaggatggaggtctaaaggagccc
aagagctcagcccagctgatggaagaatggggcctcgatgacgtagattacattttctca
gaagaagattatcatactctgactaattacaaagctttcagccagttcctcagacctctg
attgccaagaagaaccccaagatcccgatgtccaagatgatgacggtgctcggtgccaag
tggcgagagttcagtgccaacaacccgttcaagggcagctcgcccgcggggccggcgcct
gccattgctgcagctgtggagactgtcaccgttgctccaccacttgccgccagcccgccg
cagtctgccttgcccaccatcatcaggaaggctaagaccaaggagggcaagggtccaggt
gtgcggaagaaaatcaagggttccaaagacgggaagaaaaaggggaaaggaaaaaagatg
gcaggcttgaaatttcggtttggaggaatccccagcaaaaggaaaaagggctcctctagc
gaagaggaggaacgggaggaatccgactttgacagtgccagcatcaacagctcctcagtg
cgctccgagtgctcagctggcctggggaagagagggaagaggaggagaaagaaaaagagg
attgaagaaggggatgggtacgagacggaccaccaggattactgcgaggtgtgccagcag
ggcggggagatcatcctgtgtgacacatgtcctcgcgcctaccacctcgtctgcttggac
cctgagctggagaaggcccctgagggcaagtggagctgcccccactgtgagaaggagggc
atccagtgggagccgaaagaggaggaggaggaggaagaggaaggtggcgaggaggaggag
gatgaccacatggagttctgccgcgtctgtaaggacggaggggagctgctgtgctgtgac
acctgcccgtcctcctaccacctccactgcctgaacccaccgctgccagaaataccaaac
ggtgaatggctctgccctcgctgtacatgccctcccttgaagggcaaagtccaacgcatc
ctgcactgggcctggaaagagccaccggctgccccgctcccacccatgctgcccacacca
gatgcagagctggctctccccccaccaaaggtactggaggggatcccggagcgtgagttc
tttgtgaagtgggcaggtctttcctactggcactgctcctgggtcaaggagctgcagctg
gagctctaccacaccgtgatgtaccgcaactaccaacggaagaatgacatggatgagccg
ccggccttcgactacggctctggggatgaggacagccagagggagaagcggaagaacaaa
gacccacagtacgccaagatggaggagcggttctaccgctacggcatcaagcccgagtgg
atgatgatccaccgcatcttgaaccacagctttgataaaaagggagacatccattacctg
atcaagtggaaagacctgccgtatgaccagtgcacctgggagatcgatgagatagacatc
ccgtactacgaaaacctcaaacacctttattggaaccacagggagctgatgctcggggag
gacacacgccctctgaagaagctgaacaaaaaagggaaaaagctgaaagaggagaagctg
gaaaagcctccagaaacgcctctcgtggatcctacggtgaagtttgacaagcagccgtgg
tacattgatgccacgggaggcacgctccatccttaccagctggaaggactaaactggctg
aggttttcctgggcccaagggacggacacaatcctggccgatgagatggggctggggaag
actgtgcagactattgtgttcttgtattccctgtacaaggagggccactcgaaagggccg
tatctggtcagcgcacctctttccaccatcatcaactgggagcgtgagtttgagatgtgg
gcacccgacttctatgttgtgacctacacaggggacaaagaaagccggtcagtcatccgg
gaaaatgagttttcttttgaagacaatgccatccggagtggaaagaaggtcttccggatg
aagaaggaagcccagatcaagttccatgtcctgctcacttcctatgagctgatcactatt
gaccaagcggtgctgggctccatagagtgggcctgtctggtggtggatgaagcacacagg
ctgaagaacaaccagtccaaattctttagagtattaaatagctacaagattgattacaag
ctgctactcaccgggactccactccagaacaacttggaagagctctttcacctgcttaat
ttcctgactcccgagaggtttaataacctggaggggttcctggaggagtttgcagacatc
tccaaagaagaccagatcaaaaagctccatgatctgctgggtccccacatgctgcggcgg
ctcaaggcagatgtgtttaagaacatgccagccaagacggagctgatcgtgagagtggag
ctgagccagatgcagaagaagtactacaaattcatactgacgaggaatttcgaagccttg
aattcgaaaggtggtgggaatcaggtctcgctgctcaacatcatgatggacctgaagaag
tgctgtaatcacccgtacctctttcctgtggcggcggtggaggccccggttctcccgaat
ggatcctacgatgggaattctttggtcaagtcttctgggaaactgatgctgctccaaaaa
atgctgaagaagttgcgggatgggggtcacagagttctgatcttcgcccagatgacgaag
atgctggacttgctggaggatttcctggagtacgaaggctacaagtacgagcggatagac
gggggcatcaccggcggcctgcgccaggaggccatagacaggtttaacgctcctggtgct
cagcagttctgctttctcctctctacccgcgccggcggtctgggcataaaccttgctacg
gccgacacagtcattatttatgattctgactggaatccccacaatgacatccaggcgttc
agcagagctcaccgcattgggcagaacaagaaggtgatgatctatcgctttgtgaccaga
gcctccgttgaagagcgtatcacccaggtggccaaaaggaagatgatgctcacccacttg
gtggtccgccctgggttgggctccaagtcgggctccatgaccaagcaagagctggatgac
atcctcaagtttgggacagaagagctcttcaaggatgatgtggaaggcatggtgtctcag
ggacagcggatcaccatgccggatgctgtcaccccgttctctgacacgctgtcaaccaaa
gggggtgcagtgactcccggcatgaaaaaaaagcatggtggcaccccaccaggtgacaat
aaggatgtggatgacagcagcgtgatccactacgacgatgctgccatctctaagcttctg
gaccgaaaccaggatgcaactgatgacacagagctgcagaatatgaacgagtatctcagc
tcctttaaagtggcccagtatgttgtgagagaagaggatggtgtggaggaggtggaacgt
gagatcatcaagcaggaggaaaatgtggaccccgactactgggagaagctgctgcggcac
cactatgagcagcagcaggaagatctggccaggaacttggggaaagggaagagaatccgc
aagcaagtcaactacaacgatgcctcgcaggaggaccaagagtggcaggacgagctttct
gacaaccagtcagagtactccattggctccgaggatgaggatgaagactttgaagagagg
ccagaaggtcagagtggcagaagacaatcccggagacagctgaagagtgaccgggacaag
cctctccctcctttgctggcaagagttggggggaatatcgaggttctcggcttcaatgcc
cgccagcgcaaggctttcctgaatgctatcatgcgctggggcatgccgccccaggatgcc
ttcaactctcactggctggtccgggatctacgagggaagagcgagaaggaattcagggcg
tacgtctcgctcttcatgagacatttgtgtgaacctggggcagacggtgctgaaaccttt
gcggacggtgttccccgggaagggttgtcacgccagcacgtgctgacccgaataggagtc
atgtcactagtaaggaagaaggtccaggagtttgagcacgtcaatgggaagtacagcacc
ccagatctgattcttgagggcccagacagcaagaagtccagcgagattgtgtcttcagat
cccaacacccctattccggcaagcccagcacatatgcacacaggagccatggccctggca
gacaaaatagaaacacaacttgggttccaggaggaaaaggaccaagtggagcagaagtcc
aggaaggtgtctgacagccaggtgcctgcgagtgctgagaaggtggaaagcgaagagcac
ccagaaggctgcgacggcaaggagaaaccgagggaagagaagcaagaggagagtgaaaag
gctgagccttctcctgagcccctggtgaaagatgaggggattcaagagaaagacaagcct
ttggagaagccggagttgaacaacagcccagggaaaggggaggacaaagaagtcaaacaa
gaggactccaaggtggaggagaaggagcaaagcgaggctcagcaaaatggtgacaaagaa
gaagaggaggatgaaaagaaggacgacagaaacatgaacttccgattcatgttcaacatc
gctgacggtggctttacggagctgcacacgctgtggcagaacgaggaaagggctgccatc
tcctccggcaagatctatgacatctggcaccgccgacatgactactggctgttggcagga
attgtcactcatggctatgcccgctggcaggacatccagaacgacccacgctatgtgatc
ctgaacgagccgttcaagtcagagatacataaggggaactacctcgagatgaagaacaag
ttccttgcccggcggttcaagttgctggagcaggccctggtgatcgaggagcagctgcgg
agagctgcgtacctcaacatgacccaagaccccaatcacccggccatggcattgaacgcc
cgtctggctgaagtggagtgccttgccgagagccaccagcatctctccaaagagtccctg
gctgggaacaagcccgcgaacgccgtcctgcacaaggtgctgaaccagcttgaggagctg
ctgagcgacatgaaggccgatgtgacgcgcctgccctccatgctgtcccgcatcccgccc
gtggccgcccggctgcagatgtccgagcggagcatcctcagccgcctggccccccgcggc
tcttctccctccttacctccccagggctccttcggctcctcgcagatctacaacaacaac
tttgggccaaatttccgaggtcccgggccaggcgggattgtcaactacagtcagatgcct
ctgggaccgtacgtgaccg
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integrated database retrieval system
