Cariama cristata (Red-legged seriema): 104166336
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Entry
104166336 CDS
T08341
Symbol
DDX54
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccri03009
]
104166336 (DDX54)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104166336 (DDX54)
Ribosome biogenesis [BR:
ccri03009
]
Eukaryotic type
Pre-60S particles
Helicases
104166336 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104166336
NCBI-ProteinID:
XP_009704526
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
ALVLSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLV
HVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLPDCHQTVLFSATLPKLLVEF
ARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRNVVKPQDQTVVFVATK
HHTEYLKELLTAQGIRCTHIYSSLDQTARKINIAKFAQSKCPVLLVTDVAARGLDIPMLD
NVINYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGHPLVLAGAQE
MPAVLEFFIFCLAFAQRDDTLLLLGCRWGPGPRPPQLGIHPLFSARFEDTELERLKFVDS
IKTYKSKAVSXEPSSGTRCLGWGVMRSKRRHDHALIEKYQRRQQEKQAAVLKGQGLCPGP
PGPEEAEGGEEEDLQDVFSTVVGQKRKRGRGGEDSPRKKPQQLVQRDEDFYIPYRPKDFE
SERG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gccctcgtcctctcgcccacccgtgagctggccctgcagaccctcaagttcaccaaggag
ctgggcaaattcacgggcttgaagacagctttgatcctgggaggagacaagatggaggac
cagttcgccgccctgcatgagaaccccgacataatcattgccacccccgggcgcctggtg
cacgtggcggtggagatgaaactgaagctgcacaccgtggagtacgtggtgttcgacgag
gctgacaggctctttgagatgggtttcgctgagcagctccaggagatcatcgcccggctc
ccggactgccaccagaccgtcctcttctccgccacgctgcccaagctgctcgtcgagttt
gctcgggccggtctcaccgagccgatgctgatccgtctggatgtggagtccaagctcagc
gagcagctcaagctggctttcttccacgtgcgtggggatgacaaaccggccgtgctgctc
cacctgctccggaacgtggtgaagccccaggaccagacggttgtctttgtggccaccaag
caccacacagagtatctgaaggagctgctgacagcccagggcatccgctgcacacacatc
tacagctcgctggaccagactgcccgcaagatcaacattgccaagtttgcccagagcaag
tgcccggtgctgctggtcaccgatgtggccgcccgcgggcttgacatccccatgctggac
aacgtcatcaactatagcttccctgccaaggccaagctgttcctgcatcgcgtcggtcgt
gtggcccgagctggccggagcggcacggcctactcgctggtggctcccgatgagatgccc
tatgtctttgacctccacctcttcctggggcacccacttgtcctcgccggtgcccaggag
atgcccgctgtgctggagttcttcatcttctgcttggcgtttgcacagagggacgacaca
ctcttattactgggatgccggtggggtcctgggccgcgtcccccacagctgggcatccac
ccgctcttcagcgctcgctttgaagacaccgagctggagaggctgaagttcgtggacagc
attaaaacctacaagtccaaggcggtgagttgagagccgtcctcgggcacgaggtgcctg
ggttggggtgtgatgcggtcgaagcgacgccacgaccatgccctcatcgagaagtaccag
cgcaggcagcaggagaagcaggcggcggttctcaaagggcaggggctgtgcccgggcccc
cctggccctgaggaggcagaaggaggagaggaggaagacctccaggacgtgttctccacc
gtggtgggccagaagcgaaaacggggccgagggggagaagacagccccaggaaaaaacca
cagcagctggtgcagcgggacgaggacttctacatcccgtaccggcccaaggactttgag
agcgagagggggtga
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