Cariama cristata (Red-legged seriema): 104166874
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Entry
104166874 CDS
T08341
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104166874 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104166874 (MSH2)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104166874 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
DHC_N1
Motif
Other DBs
NCBI-GeneID:
104166874
NCBI-ProteinID:
XP_009705270
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
LNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVH
ALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLT
ELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKY
GIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVI
AQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEK
GKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQL
KGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCM
FATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKH
VIESAREKALELEEFQNIGKSNESEGEPPAKKFYRDLEEGEKIIQDFLCQVKALPLTDMS
EDDIKIKLKQLRNDVLAKNNSFVNEIISRTKVAS
NT seq
1726 nt
NT seq
+upstream
nt +downstream
nt
gttgaatttggttgaagcttttgtggtggatccagaactacgtcagtgccttcaagaaga
tctcttgcgtcgcttcccagatcttaaccggctggcaaagaaatttcagagacaagcagc
aaacttacaggactgttaccgaatgtatcaggctattaatcaactgcctaatgttgtaca
cgcactagaaaaacatgaaggagctcaccagatgttgttgttggcagtgtttataacgcc
tcttaatgatatctactctgacttctcaaagtttctggagatgatagaaacaacattgga
catggataaggtggagaaccatgaatttcttgtcaaggcttcttttgatcctaatttgac
agaattgagagagaaaatgaatgaactggaagaaaaaatgcagtcctttttaaagagtgc
agccaaagaactaggtttggaggctggcaaaagtatcaaactggagaccaattcacagtt
tggacatcactttcgaataacttgcaaggaggaaaaagttctccgtaacaattcgaaata
tggaatagttgatacgcagaagaatggtgtgaaatttacgaacagcaaactgagctccgt
caatgatgaatatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaa
agaaatcattaacattgcttcaggttatgcagaaccaatacagacgatgaatgatgtgat
agctcaattagatgcaattgtcagttttgctcatgtgtcaaacggagcaccagtgccgta
tgttcgtcctgtcattctggagaagggacaaggaaggattgtgctgaaaggtgccaggca
tccttgcattgaagtgcaagatgaggtggccttcatccccaatgacattacatttgagaa
gggcaagcagatgttccacattattactggccctaacatggggggaaaatcaacctacat
ccgacagacaggggtgattgttcttatggcccaaattgggtgttttgtaccatgcgactc
tgcagaaataaccattgtggattgtatcctggctcgggtgggagctggagacagtcagct
gaaaggtgtgtctactttcatggctgaaatgttagaaactgcttccatccttaggacagc
atctgaaaactccctgataatcattgatgagctgggaagaggaacttctacctacgatgg
ctttggcttagcatgggctatttcagaatacattgctagcaaaatctgtgctttctgtat
gtttgctacacattttcatgaactgacagctcttgctgaccaagtaccaacagtaaataa
cctacatgttactgctctgaccagcgatgacacactgacgatgctttatcgtgtcaagga
aggtgtttgtgaccagagttttggaatacatgtagcagagttggcagctttcccaaaaca
tgtgatagaaagtgcaagagagaaagcattggagctggaggagtttcagaacattggcaa
gtccaacgaatctgaaggagagccaccagccaagaaattctacagggatttagaggaagg
tgaaaagataattcaggattttctttgtcaagtgaaagcattgcccctgacagatatgtc
agaagacgacatcaaaatcaagctgaaacagctgagaaatgatgtgttggcaaagaacaa
cagttttgtgaatgaaatcatttcccgaacaaaagttgcatcatga
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