Cariama cristata (Red-legged seriema): 104167525
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Entry
104167525 CDS
T08341
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104167525 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104167525 (XRCC6)
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104167525 (XRCC6)
Spliceosome [BR:
ccri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104167525 (XRCC6)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104167525 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
SAP_new25
TSC22
Motif
Other DBs
NCBI-GeneID:
104167525
NCBI-ProteinID:
XP_009706116
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
LADYRFSGRDSLIFLVDASKAMFESDGAGVIPFDVTIQCIRNVYTSKIISSDKDLLSVVF
YGTEKNKNSADFKHIYVLQELDNPGAKRVLELDEYMGDKGRVCFRETFGHNADYSLGEAL
WACSNLFSDVRVRLSHKRIMLFTNEDDPHANDSAKAKLARTRAGDLRDTGIILDLMHLKK
PGGFDISLFYRDIINIAEDEDLGIHPEESEKLEHLMKKVRAKESKKRTSVRLNLHLSKDL
SLSVGVYNLIQKAYKPYPVKLYRETNEPVKTKTRTFNGKTGSLLLPSDTKRAQTYGNRQI
VLEKEETEELKRFDSPGLFVIGFKPLSMLKQHHHIKPSQFIYPEESLVSGSTTLFNALLM
KCLEREVMVLCRFTARRNTPPRFVALVPQEEELDEQKVQIAPPGFHIIFLPYADDKRNVD
FTEKVPASREQVDKMKEIIQKLRFKYRTDSFENPVLQQHFRNLEALALGMMEPEQAEDLT
MPKAEEMNRRLGNLVEEFKQLVYPPDYNPDGKAVKRKQASDSQLEKRPKVELSKDELRSH
VRKGTLGKLTVPVLKDACRLYGLKGGGKKQELMDALTEYFNEH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttagcggattacaggttctcgggtcgggacagcctcattttcttagtcgatgcctccaag
gccatgtttgagtccgacggggccggagtgattccctttgacgtgaccatccagtgcatc
cggaatgtgtataccagcaaaattattagtagtgacaaggacctgttaagtgtcgtgttc
tatggtacagaaaagaacaagaactcggcagatttcaagcacatctatgttcttcaggag
ctggataatccaggtgcaaagcgtgttctggagctggacgaatacatgggagacaaagga
cgagtatgtttccgtgagacctttggtcacaatgctgactattccctgggtgaagcactc
tgggcctgctctaatctcttcagtgatgtccgagtcaggctgagccacaaaaggatcatg
ctcttcaccaacgaggatgaccctcatgccaatgacagcgctaaagccaagctggccagg
acgagagctggtgatctgagagacacaggtatcatcctggacttgatgcacttgaagaag
cctggagggttcgatatctctttgttctacagggatatcataaacatagcagaggatgag
gatcttgggatccatcctgaggagtcggagaaactggaacatctcatgaagaaagtacga
gcaaaggagtcaaagaaacggacttcagtcaggttaaatctgcatctgagcaaagatctg
tcgctttctgttggcgtttacaaccttattcaaaaagcttataagccctatccggtgaag
ctttatcgggaaactaatgaaccggttaaaacaaaaacaaggacgtttaatggaaaaaca
ggcagcttgctcctgcctagtgacacaaaaagggctcagacgtatggaaatcgccagatt
gtgctggagaaagaggaaacagaagaattaaaacggtttgattctccgggcttgtttgtg
attggcttcaaaccactttcgatgctaaaacagcaccaccatatcaagccctcccagttc
atttatcctgaggagtccctagtaagtgggagtacaacgctatttaatgccttattgatg
aagtgcttggagagggaggtgatggtactgtgcagatttaccgcccgccggaacactcct
cctcgctttgtggccctggttccccaggaggaagagctggatgagcagaaagtgcagata
gcccctccaggtttccacatcattttcctaccctatgcagatgacaaacggaatgttgat
tttacagaaaaggtgccagccagtcgagagcaggtggacaaaatgaaggaaataattcaa
aaactccggttcaaatacaggactgacagctttgagaacccagttttgcagcagcatttc
aggaatctggaggctttggcgctgggtatgatggaaccagaacaagctgaggatcttaca
atgccaaaggctgaagagatgaaccgcaggctgggcaacctggtggaggagtttaagcag
ctggtttatccccctgactacaatcctgatgggaaggctgtaaagcgaaaacaagcttct
gatagtcaactggagaagaggcccaaggtagaactctcaaaagatgaactgcggagtcat
gtgcggaagggcactctaggcaagctgacggtacctgttctgaaggatgcatgcaggctt
tacgggctgaagggtggggggaagaagcaggagctcatggacgcgttaactgagtacttt
aatgagcactaa
DBGET
integrated database retrieval system
