Cariama cristata (Red-legged seriema): 104167724
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Entry
104167724 CDS
T08341
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03018
RNA degradation
ccri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104167724 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
104167724 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104167724 (LSM8)
03041 Spliceosome [BR:
ccri03041
]
104167724 (LSM8)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104167724 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
104167724 (LSM8)
Spliceosome [BR:
ccri03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104167724 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
NCAB1
Motif
Other DBs
NCBI-GeneID:
104167724
NCBI-ProteinID:
XP_009706364
LinkDB
All DBs
Position
Unknown
AA seq
106 aa
AA seq
DB search
SANVNGSISDTCKHFLNELSGTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQ
GVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
tcagcaaatgttaatggttctatttcagatacctgtaaacatttccttaatgaactatca
ggtactgttgcagtaattacttctgatggaagaatgattgtgggaaccctcaaaggtttt
gatcagaccattaacttgattttggatgaaagccacgaacgagtgttcagctcttcacaa
ggagttgagcaagtagtgctgggattatacattgtaagaggtgataacgttgctgtcatt
ggtgagattgatgaagagacagattcagctcttgacttggggaatattcgagcagaacca
ttaaactcagttgtgcattga
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integrated database retrieval system
