Cariama cristata (Red-legged seriema): 104167855
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Entry
104167855 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccri04131
]
104167855
Membrane trafficking [BR:
ccri04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104167855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Mucin
hEGF
Motif
Other DBs
NCBI-GeneID:
104167855
NCBI-ProteinID:
XP_009706547
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MCDQGLQAEGYFSWRLLDNKVMSGLEQVHSCGFCTLSKLAGVRLLAQGAKAKCEESQFPC
SNGRCIPLLWKCDGDEDCSDGSDESACVKKTCAESDFVCISGQCVPNRWQCDGDPDCEDG
SDESAEVCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSPAEFT
CSSGQCISKSFVCNRQDDCSDGSDELECAPPTCGVHEFRCKTSACIPISWVCDDDADCSD
YSDESLEQCGRQPAPPVKCSASEVQCGSGECIHKKWRCDGDPDCKDGSDEINCPSRTCRP
DQFRCEDGNCIHGSRQCNGVRDCLDGTDEASCNNVIQCSGPGKFKCRSGECIDINKVCNQ
QRDCKDWSDEPLKECNVNECLVNNGGCSHICRDLVIGYECDCPAGFELIDKRTCGDIDEC
QNPGICSQICINLKGGYKCECSRGYQMDLASGVCKAVGKEPCLIFTNRRDIRKIGLERKE
YIQLVEQLRNTIALDADIAEQKLYWADFSQKAIFSASIDTRDKVGTHVRILDNIHSPAGI
AVDWVYKNIYWSDSTAKTISVASLDGTKRKVLFLSELREPASIAVDPLSGFMYWSDWGEP
AXXXXXXXXXXGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHTLSSVDLNGQD
RRIVLKSYMFLPHPLALTIFEDRVYWIDGENEAVYGANKFTGSELVTLVNNLNDAQDIIV
YHELVQPSGRNWCEETMANGGCSYLCLPAPQINEHSPKYTCACPAGYFLYEDGLRCAGTG
TTVAYTEAKDTSTTEKSPTVGLVPGGFNINGTSQVAVAGGTSAAWTVLPLLLLVMAAVAG
YFMWRNWQHKNMKSMNFDNPVYLKTTEEDLTLDIGRHSSSVGHTYPAISVVSTDEDM
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccagggcttgcaagcagaaggctacttctcttggaggttactggacaacaag
gtgatgtcaggtttagagcaagttcatagctgtggcttctgcaccctctctaagctggct
ggggtgcgccttctagcacaaggtgcaaaagcaaaatgtgaggaatcccaattcccatgt
agtaatggacgctgtattcctttactctggaaatgtgatggtgatgaagactgttcagat
ggcagtgatgagagtgcttgtgtgaagaagacatgtgctgaatctgattttgtgtgcatc
agtggccagtgtgtgcctaacagatggcagtgtgatggagatccggactgcgaggatggg
tctgacgagagtgctgaagtgtgccatatgagaacatgccgggtaaatgaaatcagctgt
ggtcctcagtcaacccagtgtatcccagtgtcctggaaatgtgatggtgaaaaagactgt
gacagtggagaagatgaagagaattgtggcaatgtgacttgtagtccagcagagttcaca
tgcagcagcgggcaatgtatttccaagagctttgtctgcaatcgtcaagatgactgcagt
gatggcagtgacgagctggagtgtgcacctcctacctgtggagttcatgagttccggtgc
aagacctctgcttgcatccccatcagctgggtgtgtgatgatgatgctgactgctctgac
tactcagatgaatctctagagcaatgtggccgccagcctgcacctcctgtgaagtgctct
gctagtgaggtgcaatgtggctcaggtgaatgtatccacaaaaagtggcgctgtgatgga
gatcctgactgcaaggatggaagtgatgaaatcaactgcccttctcggacctgcagacca
gaccagttcagatgtgaagatgggaactgcatccatgggagtaggcagtgcaatggtgtg
agagactgtctggatggcactgatgaagcaagttgtaacaatgttattcagtgctctgga
cctggcaaattcaagtgcagaagtggagaatgcatagatatcaataaagtgtgtaaccag
cagagagactgcaaggactggagtgatgaacccctcaaggagtgtaacgtaaatgaatgt
ctggtgaacaatggtggatgctctcatatctgcagggatctcgttattggctatgaatgt
gactgtccagctgggtttgagcttatagacaagagaacctgtggagatattgatgaatgc
cagaaccctggtatctgtagtcaaatctgtatcaacctgaaagggggctacaaatgtgaa
tgtagccgtggctatcaaatggatcttgcttctggggtgtgcaaggctgtgggaaaagaa
ccatgtctaattttcaccaaccgccgggatatcaggaagatcggccttgagaggaaagaa
tacattcagctagtagagcagctaagaaacaccatagctctagatgctgatattgctgag
caaaagctttactgggctgacttcagccaaaaagcaatcttcagtgcctctattgatacc
cgtgataaagttggaacacacgtcagaatcctggacaacatacacagccctgcaggaatt
gctgttgactgggtttataagaacatctactggtctgactcaactgcaaagaccatttca
gtggctagcctagatggcacaaaaagaaaggttttgtttctctccgagctgagagagccg
gcttctattgctgtagatcctctctctggctttatgtactggtcagactggggtgaacca
gcnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaggaatgaatggatttgacagacagcag
cttgtgacaacagaaatccaatggcctaatggaattgctctagatcttgtaaaaagccgt
ctgtactggcttgattctaaactacacacgctgtcaagtgtggacttgaatggccaggac
cgtagaattgtgctgaagtcttatatgttccttcctcatcctcttgctctaacaatattt
gaggatcgtgtctactggattgatggagagaatgaggcagtctatggtgccaacaaattt
actggatctgaattggttacactagtgaacaacctcaatgatgcacaggacatcattgtg
tatcacgaacttgttcagccttcaggcaggaactggtgtgaagagaccatggcaaatgga
ggctgcagctacctgtgcctgcctgctcctcagataaatgaacactctccaaagtacacc
tgtgcatgtcctgctggatacttcttgtatgaggatggtctgaggtgtgcaggtactgga
acaactgtggcttacactgaggctaaagataccagcacaacagaaaaatctccaactgtt
ggactagttcctggaggattcaacatcaatggtacatctcaagtagctgtagctggagga
acatcagcagcttggactgttcttcctctcttgttgctggtgatggctgcagtggctggc
tacttcatgtggcgtaactggcagcacaagaacatgaaaagcatgaattttgataatcct
gtctacctgaaaactacagaagaggacctcacacttgatattggaagacacagcagttca
gtaggacacacctaccctgcaatatctgttgtaagcacagatgaggatatgtga
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