Cariama cristata (Red-legged seriema): 104168048
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Entry
104168048 CDS
T08341
Symbol
PATL1
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104168048 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104168048 (PATL1)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104168048 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
104168048 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
104168048
NCBI-ProteinID:
XP_009706792
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
PVCSRVPFLPPASQHRNLNGSLGDRGGHRXHQEQMRKDPYANLMLQREKDWVSKIQMMQL
QSTDPYLDDYYYQNYFQKLEKLSAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGS
LGKLTVSSVNNPRKMIDAVVTSRSEDDVSSDPASSPRQLRQVWXTLVTIEKTYSLLLDVE
DYERRYLLSLEGERPALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMCIRKGKRLV
ARILPFLSPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQ
QLTNLPQSATAPAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDANAELMQDNQWTEL
MLMATRELLRIPQAALAKPVSTPSNLVSLFSRYVDQQKLNLLETKL
NT seq
1222 nt
NT seq
+upstream
nt +downstream
nt
ctcctgtgtgctcacgggtgcccttcttgcctcctgccagccagcaccggaacctcaacg
gctcgctgggggaccgcgggggtcaccgtngccaccaggagcagatgcgcaaagacccct
atgccaacctcatgctgcagcgggaaaaggactgggtttccaagatccagatgatgcagc
tgcagagcactgatccctacctggatgactattactaccagaattacttccagaagctgg
agaagttgtcagcagcggaggaagtccacggtgatggtcccaagaaggaacgcactaaac
tcatcacacctcaggtggctaagctggagcacacctacaagccagtgcagtttgagggct
cgctggggaagctcacggtctccagcgtgaacaaccctcgaaagatgatcgacgcggtgg
tgacctcccgcagcgaggatgatgtgagttctgaccctgcctcctctccgagacagctcc
gtcaagtgtggtagaccctggtgacgatcgagaagacgtacagtctcctcctggacgtgg
aggactatgagagacgctacctcctgagcctggaaggtgagcggccggccctgatgggcg
agaggaagcagaagatctgcgatatgtatgacaatctgagggggaaggcacccgggcagg
agaggccgagtgacgaccacttcatgcagatcatgtgtatccggaaagggaagcgcctcg
tggcccggatcctccccttcttgtcacccgaacaagcggctgacgtactcatggcgacgg
ccaggaacctgcccttcctcatcaagaaggatgctcaggatgaggtgctgccctgcctgt
tgaggcccttctcgcacgttctctaccaccttcccttggggacggtcaccagccttgtgc
agcagctaacgaacctacctcagagcgcgaccgcgccagcgcccaccaacctgcacctca
ctgctgtgctccaaaacaagttcggtctgtccctgctgtacttggtcttgagccgcggag
aggaattgcagagctcggacgcgaatgcggagctaatgcaggacaaccagtggacggagc
tgatgcttatggcaacccgggagctcctgcgaatccctcaggcagccttggccaagccgg
tgtccaccccctcgaacctggtctccctcttctctcgctacgtcgaccagcagaagctga
acctgctggagacaaaactgca
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