Cariama cristata (Red-legged seriema): 104168182
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Entry
104168182 CDS
T08341
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccri01002
]
104168182 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccri04121
]
104168182 (USP42)
Enzymes [BR:
ccri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104168182 (USP42)
Peptidases and inhibitors [BR:
ccri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104168182 (USP42)
Ubiquitin system [BR:
ccri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104168182 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
104168182
NCBI-ProteinID:
XP_009706972
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVDKGAGDAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANNKQAGFMGPRLPPHMIKNSSHLNGNGPLKEDPHTVGGALKRPSS
APPTACIQNWSITRPSNTDPSKNQKITISIRNKLPTHQTMSQPDCRSSAVEDEDLSKPVP
SSTITNSSAAESTSNASTMSVATNISKQEVPDEIFVEPAVNGNPKLSSDNAVPYGAESSG
KSEESKGLFKRSCNIISSNGILIGKVVRTLQNSHSSCQNAEEERSQHELPKNDSLNGAIS
LDNESKENGLKLDDSTCQVQPVKPSEIFFSKTNGLLETMPIALSPLPQEIILESFTYGQL
NSLSEEISVPGPQKSSENDALMENVVMEALFAYEESRKVPSNFSCEVENLFTQSDSETIS
TKEEVTESVITKADNAHPNINGQHKVRKKSLDAEDEFLGQCESEDSRDKDKLRTSKEPEL
ISKENPLYIRGSPESEEKVGQTSSVKSDIECSSKKLASLDVTDKCQDTKDISNNYVEVPP
VNDSSITKLDKVLESQFSRENEGLSNKKCEEDKHRKKYKKKPYETKKTDQEHYRKKRENS
DTEEKEKQTRSKPDDHSHKRRCSRSMETNRQNRHKQEYCNESKYRSSHNERNSPNNGKSS
GKYSRYRSRSRERTEQDRNRYYHSKGERTWSRERYYQDEPRRWEKCRYYSDYYSSHGTRD
GRERKSFHCDKDFDKSSQAYNNRSHKDYHCKSRWPHSALSREEDVHHFSSHRANLHHCSV
PQRQSEKYSRERHALPPVSAHSNSEDSSRENEKERLRNDKTKYSHTEGSGSEIEKKCRKI
DDQRMKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKRKKKKKKKKHIRKLKG
FLEYLDSRFQKKTQEKKEESSPPAGYLCEQYRNQGSKQPYKEGKPSGAGECKKYSSIASN
EYVKGAELTDGSLQHSN
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaagtcatcatcaaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacatcacgcactgccaatttgggacgg
gtaccacctgcagaagatccaaacaaagtctctgtggacaaaggagctggagatgccatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgat
ggaattgccccgccacaaaggattctttttccacctgagaaaatttgtatggattggcaa
caaacacaaagtgttggggttggactgcagaatctcggcaacacatgtttccttaattct
actctacaatgtttgacctacacgcctcctcttgccaattacatgctttctcttgaacac
actcagtcatgtcatgaagaaggattctgtatgatgtgcacaatggaaactcatattaac
caggtcctatgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcctgcttgaatggaagcaccaaattggacagatcttct
caagcaacaacacttatttatcaaatatttggaggatatctaagatcccgagtaaagtgc
ttgaactgcaaagcggtttcggatacgtatgagccattccttgatattacattggatata
aaggcagttacatctgtcaccagagctctcgaacaatttgtgaaaccggaacaactggac
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttcctgcgtcaaagaggtat
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaatttcaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcgtatatg
tcccaatcaattggagaaccactcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggccggtaatggactttggtat
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tatgtgcttttttatatcaggcgctatgatttgacacttggagaacgtgctttttattta
ccagcaccgtcgtatcctcgttcattccttggtcagcggggggctaataataagcaagct
ggatttatgggaccacgacttcctcctcatatgattaagaattcaagtcatttaaatgga
aatggacccctgaaagaggatccacatactgttggtggcgccctaaaaaggccgtcttca
gctccgccaacagcttgcattcaaaactggtcaattaccaggccttcaaatacggatcca
tcaaaaaaccagaagatcactatcagtattcgtaacaaattgcctacacatcagactatg
tcacaacctgactgtcgtagcagtgctgtggaggatgaggatctaagcaagcctgttcct
tcgtccacgattacaaattcttctgcagcagagtctacctcaaatgcatctacaatgtca
gttgctactaatatttccaaacaggaagttcctgatgaaatttttgttgagccagcagtg
aatggaaatcctaaactcagctctgataatgcagtcccttacggtgcagaatcttcagga
aaatctgaggagtcgaagggcttgtttaaaaggagttgcaacataatatcttctaatgga
attttgattggaaaggtggtccgtacattgcagaattcccattcttcctgtcagaatgct
gaagaagaaagatcccagcatgagctgccaaaaaatgattcactaaatggtgctattagt
ttagataatgaatctaaagaaaatggactgaaacttgatgattccacttgccaagtccaa
cctgttaaaccttctgagattttcttttctaaaacaaacggattgcttgaaacaatgcct
atagctttgtcgccgcttcctcaagaaataatcttagaatctttcacatacggccagttg
aacagcttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaatgatgct
cttatggagaatgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttcct
tccaactttagctgtgaggttgagaatctttttactcagtcagattctgaaaccatttct
accaaagaagaagttactgaaagtgttataacaaaagctgataatgcacatcccaatatc
aatggtcagcacaaggtcaggaaaaaatccttggacgctgaagatgaattccttgggcag
tgtgagtctgaagatagtagagacaaagacaaactaagaacatcaaaagaacctgaactt
atttcaaaagaaaatcctttgtacatcagaggatctcctgagagcgaagagaaagtaggg
caaacttcctctgtaaagtctgacattgaatgtagttctaaaaaacttgcatctctagat
gttacagataaatgccaagatacaaaggacatttctaataactatgtagaggtaccacct
gttaatgactcttctattacaaagctggataaagttttggagagtcaattttctagagaa
aatgagggactgagtaataaaaaatgtgaagaagataaacataggaaaaaatataagaaa
aaaccatacgagactaaaaaaactgaccaagagcactaccgaaagaagagagaaaactca
gacactgaagagaaggagaagcaaaccagaagcaaaccagatgatcattcccacaagaga
aggtgctctcgcagcatggaaacaaataggcaaaatcgtcataagcaggagtattgcaat
gaaagcaaatacagatcttcccataatgaaagaaacagtccaaataatggcaaaagctca
ggaaaatattctcgttatagatcccgaagcagagaaagaacagaacaagacaggaatagg
tattatcattccaaaggagagagaacttggagcagagaaagatactatcaagatgaacca
cggagatgggaaaaatgcagatactacagtgattattattcctctcatggaacaagagat
ggtagagagagaaagtcctttcattgtgataaagactttgacaaatcaagtcaagcttac
aacaacaggtcacataaggattatcattgcaaaagcagatggcctcacagcgcactctcc
agagaggaagatgtacatcactttagcagccacagagcaaacttacatcattgctcagta
cctcagcggcaatctgaaaaatattctcgtgaaaggcatgcacttccacctgtgtcagcc
cattcaaattctgaggactcttcccgggaaaatgaaaaagaaagactaagaaatgacaaa
acaaaatatagccacacagaaggaagcggaagtgaaatagaaaagaaatgccgaaagata
gatgaccaaagaatgaaaaaatataagaaggtcaagaagaaaaagaagtccaaagataaa
catcgagagaaggattacaaactttatgatttggatttctctgtgctccgctttgacaat
gacaatcgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactgaaaggc
ttcttggaatatttagattctcgtttccagaagaaaacacaggagaagaaggaagaatcc
tctcctccagctggctatttatgtgagcaatacagaaaccagggcagtaaacaaccctac
aaggaagggaagccttctggtgcaggtgaatgcaagaaatacagctccatcgcatccaat
gagtatgttaaaggtgcggagcttactgatggaagccttcaacactcaaactaa
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integrated database retrieval system
