Cariama cristata (Red-legged seriema): 104168266 Help Entry 104168266         CDS       T08341                                  Symbol HTT Name (RefSeq) huntingtin   KO K04533   huntingtin Organism ccri  Cariama cristata (Red-legged seriema) Brite KEGG Orthology (KO) [BR:ccri00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccri03019]     104168266 (HTT)    04131 Membrane trafficking [BR:ccri04131]     104168266 (HTT)    03029 Mitochondrial biogenesis [BR:ccri03029]     104168266 (HTT) Messenger RNA biogenesis [BR:ccri03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      104168266 (HTT) Membrane trafficking [BR:ccri04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     104168266 (HTT) Mitochondrial biogenesis [BR:ccri03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     104168266 (HTT) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_EF3_N Rad26-like_helical_rpts Motif Other DBs NCBI-GeneID:  104168266 NCBI-ProteinID:  XP_009707146 LinkDB All DBs Position Unknown AA seq 3096 aa AA seqDB search MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK IMAAFGNFANDNEIKVLLKTFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIVQVSVSKDESASR NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSAASFAASMKGEI TSELASSSGVSTAGSVGSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGEE DDVLSQSSSQISAVQSDPTMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLEGA EGQYSGMQIGQLQDEDDEAANILQDDSSESFRNSSVALQQPHLLKTMSHSRQPSDSSVDR FTSKEDAADPGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR GATAILCGTIVNSILIKSRFDVEKWLINVRNSTGNLFSLVDCVPLLQKMLKDESSVTCKL ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG KTESLHRGIHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYSMLQSPTDVTMENNLSRV IAAISHALTVSTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSPSDEAQKGCTIG MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEP WPALADRSLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKASLPSLTNPPSLSPIRRKG KERESVEQASVPMSPKKGGETSPATRQTDAAGPVPTSKSSSVGSFYHLPSYLKLYDVLKA THANYKVTLDLQNTNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTH FTQALADASLRNMVQTEQEHDASGWFDVLQKVSTQLKTGITSAAKHRADKNAIHSHIRLF EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASERKAVTHAIPALQPI VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRHGENNVSAPE DRTEVKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN YTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDSESKRGMCNREIVRRGALILFCD YVCQNLHDSEHLTWLIVNHVQDLIHLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL QNSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG EDQPALENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSL LAPCLSLGMNEISRDQKSSFFETTRRVTLDHVSSTVQNFPASHQVFQPLLPTEPSAYWKK LSDIFGDEAMYQSMMVLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVMSVEALSWHL MHDQIPLSVDLQAALDCCCLTLQQPSLWNLLASAANVTYACSLINCIRFIIEAVAVEPGN QLLSPERKKNTSKGLSEGEVDSNTQKTKHITAACEMVAEMVECLQTVLALGHKRNSSIPA FLTPVLKNIIISLARLPLVNSYTRVPPLVWRLGWSPKPAGDFGTVFPEIPVEFLQEKEIF KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAI TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD NIATHHLYQAWDPVPSLAPATTGALIGHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN NITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILIQYLIPAT CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII SEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM YTGKEKISPSRTTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKITAC NT seq 9291 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaagttgatgaaggccttcgaatcgttgcgctccttccagcagcag cagggtccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact accaagaaagatcgggtgaatcattgcctaacaatatgtgaaaacatagttgctcagtct ttaagaaattcgccagaatttcagaaactgctggggattgctatggaactctttctcctc tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt attaaagctttgatggattccaatcttcctaggttacaactagaactgtataaagagatt aaaaagaatggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgcc catctagttcggcctcaaaagtgcaggccgtacttagtaaaccttttgccctgtctaaca cgaataagtaagagaccagaagaatcggtacaagagactctagctgcggcaataccaaaa atcatggcagcgtttggcaattttgcaaacgacaatgagattaaggttttattgaagact ttcatagctaaccttaaatccagttcccctactatccgtcgaacggcagcaggatcagca gtaagcatctgtcaacattcgcgaagaatgcagtatttttatgcctggttattgaatgta cttctaggtttgttggttcctgtagaagatgatcatcctactctcttaatcctgggtgtt ttacttacactaaggtatctcatacctttattgcaacaacaagtaaaggataccagcctg aaaggcagttttggcgtaacaagaaaagaaacagagatttcaccttcaccagaacaactt atacaggtttatgaattaactctgcattacacccagcatcaggaccataatgttgtgact ggagctttagaattattacaacagctttttagaacgccaccacctgaacttctccatgcc cttaccgcttcagggggcattgtgcaggtcagtgtatccaaagatgaatctgccagcagg aaccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt cttgcaagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaagatgat tctgaaacccgctcagatgtcagtgctgcatcgtttgcagcttctatgaagggtgagata acgagtgaactagcttcttcatcaggtgtatcaacagctggatcagtagggagttcagct gctgatcctactggacatgatatcattactgagcagccacgttctcaacatacattacag tcagactctgtagacctgacaagctgtgatttgacaagtacagctactgaaggggaagaa gatgacgtgcttagccaaagctccagccaaatcagtgctgtccagtcagatcccactatg gacttaaatgatggtacacaggcttcctcaccagttagtgatagctctcagactactaca gaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttggagggtgct gaaggacagtattctggaatgcagattgggcagctgcaggatgaggacgatgaggctgca aatattctccaagatgattcatcagagtctttcagaaattcttctgttgctcttcaacag cctcacctgttgaaaaccatgagccatagtaggcaaccttctgatagcagcgtagataga tttacatcaaaagaagatgctgcagatcctggtgatcacgaaaataagccctccagggta aaaggagacataggtcactataccgatggaaattctgctcctctagtgcactgcgttaga cttctctcagcctcttttctacttactggggagaagggagctttagttcctgatagagat gtgagagtcagtgtaaaagccctggcagtaagttgtgttggagcagctgttgcgcttcac cctgagtctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagagtat gaggagcagtatgtatcagatattctgaactacattgatcatggagatccccagattaga ggagctactgccattctgtgtggaacaattgtcaactccattctaattaagtcccgcttt gatgtggaaaaatggctaataaacgtcagaaactcaacaggaaatctcttttccttggta gactgcgtacctctgttacagaaaatgctgaaagatgagtcctctgttacgtgcaaactg gcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgaacta ggtttacaattaattgttgacctccttacactgaagaatagctcatattggctagtaagg acggaacttctggaaacacttgcagaggtagatttccggctagtcagcttcttggaagga aaaactgagagcttgcacagaggtattcatcattatactggtctactaaaacttcaggag agagtgcttaataatgtcgtaatatgtctgcttggagatgaagatccaagagtgagacat gtagctgcagcctcattgatgaggcttgttccaaagctgttttataactgtgatcaagga caggctgatccagttgtggcagtggcaagagaccaaagcagcgtctacctgaaactacta atgcatgaaacacagcctccatctcactttgcggtgagcactatcaccagaacatataga ggttacagtatgctgcaaagtccaacagatgtcactatggaaaacaatctctcaagggtt attgcagcaatttcccatgcattgacggtatccactacaagagcacttacgtttggctgc tgtgaagctttgtgtcttctctctacaacgtttccagtctgcacctggagtgtgggatgg cactgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgcaccattgga atggccggcatggttctgtctctcctttcgtcagcatggttcccactggacctctctgca catcaggatgctttgattttgactggaaatttgcttgcagcaagtgctcccaaatgctta aagaatccgtggagtgctgaagaagattcaaaccaaggtgctgcaaagcaggaggaaccc tggccagctctggcagatcgaagtcttgttactttagtagaacagctcttttctcacctg ctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggcccagcagta aaggcatcattaccttctctcacaaacccaccttctcttagcccaattcggagaaagggg aaagagagagagtctgtcgaacaggcgtctgtgccaatgagccctaaaaagggtggtgaa acgagtccagctactaggcaaactgatgctgctgggcctgttccaacaagtaaatcatct tcagtaggaagcttttatcatcttccatcatatctgaagttatatgatgtcttgaaagca acccatgctaattataaggttactttggatctccagaacactaatgaaaagtttggatgt ttcttacggtctgccttagatgttctgtctcagatcttggaacttgctactcttcaagac attggaaagtgtgtagaagaaattttgggatacctaaaatcatgtttcaacagagaacca acaatggcaacagtttgtgtacagcagttactgaaaacattgtttgggacaaatctggct tctcagtatgatggcttgtcttcaaaccccaacaaagctcaaggcaaagctcaacgctta ggttcttccaatttgagacctggtctctatcattattgcttcatggcaccttacacgcat ttcacacaggcccttgctgatgctagtctaaggaacatggttcagactgaacaggaacac gatgcttcaggatggtttgatgtgctgcaaaaagtttctacacagctgaaaactggcatt accagtgcagcaaaacatcgtgctgataagaatgctattcacagtcacattcgtttattt gaaccccttgtcataaaagcattgaaacaatatactacaacaacatcggtacagctgcag agacaagttctagacttgcttgctcaactggttcagctacgagttaactactgtcttctg gattcggatcaggtgtttattggatttgtgctaaagcagttcgaatacattgaagtagga cagttcagggaatctgaagctattattcctaatatcttttttttcctggtgttgctgtct tacgagcggtatcattccaaacagataatcggaattcctaagatcattcagctgtgtgat ggtatcatggcgagtgagaggaaagctgttacacatgcaataccagctctgcaacccatt gttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagttggaa acacagaaggaggtagtagtgtcaatgctgctgagacttattcagtaccatcaggtgcta gaaatgttcatcttagtattacaacagtgtcataaagaaaatgaagacaaatggaaaaga ttgtcccggcaaatagctgatattattctcccaatgcttgcaaaacaacagatgcatata gactctcatgatgctctgggagtattgaacactttgtttgaaattttagctccttcatcc cttcgccctgtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatca gtgagcactgtacagctgtggatttcaggaattttagctatccttagagttctgatttca cagtcaacagaagacattgttctgtctcgtatacaagagctttccttctcaccatatttg atttcgtgtcaagcaattaacagactgagacatggagaaaataatgtatccgcaccagag gatcgcactgaggttaaacaggctaaatatctgcctgaagagacattttctaggttctta ctacaactggttggcattctactggaagatattgttaccaaacaattgaaagtggatatg aatgagcagcaacatactttctattgccaggagctgggcacgctgcttatgtgcttaata catatcttcaagtcagggatgtttagaagaatcacagctgcagccaccagactttttaca ggagatggatctgatggtagtttctatacccttgaaagtttgagtgaccttgttcagtcc atgattcctacgcatccttctttagttctcctctggtgtcaaattctgcttcttgtcaat tataccaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttct actactaaattacttagccctcagatatctggagacagtgatgaatcagattcagaatcc aaacgtggcatgtgcaatcgagagattgtgagaagaggagcactcattcttttttgtgac tacgtttgtcaaaacctacatgattcagaacacttgacctggcttattgtgaatcacgtt caagacttgattcatctgtcccatgagcctccagtacaagactttattagtgctgttcac aggaattcagcagctagtgggctcttcatccaggccattcagtcacggtgtgagaatctt gcagctcctacaactctgaagaagactttacagtgcttagagggaatacatctcagccag tctggggctgtcttaacattatacgttgataagcttttgtgtactccattccgtgtgctt gctcgcatggttgacacactagcttgccgtcgggtagaaatgcttttggctgcaacttta cagaacagcattactcagttaccagttgaagaactggatagaattcaggaataccttcaa aacagtggattagcaacaagacatcaaagactttactcgctcttggataggtttcgtctt atggtagcaccagacacaactagtccttcacctctggttacctcacacccactagatgga gaagaccaaccagctttagagaatgtaattctagacaaagactggtatgtgtcactagtg cggtcgcagtgttgcatcaagtctgactcagcactgctagaaggcgcagagctggtaaat agaattcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctaagcttg ttagcaccttgtttaagccttggcatgaatgaaatctcgagagaccagaagagtagcttc tttgaaacaactcggagagtaactctggatcatgtgtctagcactgtacaaaactttcct gccagccaccaggtttttcaaccactattgccaactgagccatcagcctactggaaaaaa ctaagcgatatctttggagatgaggcgatgtatcagtctatgatggtactttgtcgtgca ctggctcagtatttgttgttgctctcaaaactaccagctggtctccgtgttcctcctgac aaagaggatgatatcctgaaattcgtggttatgtcagtagaggcactatcatggcattta atgcatgaccagattccattgagtgtagatcttcaagctgctctggattgttgctgtctg acattacagcagcctagtctctggaatttgctggcttctgcagctaatgtgacatatgct tgttccttaattaattgcattagatttattatagaagcagttgctgttgaacctggtaat caacttcttagtcctgaaagaaagaagaatacttcaaaaggcttaagtgagggtgaagtt gattcaaatacacagaaaactaaacacattactgcagcttgtgaaatggtagctgagatg gtggaatgcttacaaactgtcttggcactgggacacaaaagaaacagcagtatcccagcg tttcttactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaac agttacacaagagtacctcccttggtctggagattaggctggtcaccaaagcctgcaggt gatttcggcacagtttttcctgaaatcccagtagaatttctccaagaaaaagaaatcttt aaggagttcatctatcgcattaatacacttggatggatcagccgtactcagtttgaagag acttgggctactttgcttggtgtgcttgtaactcagcctattgtaatggaccaagaggag aaccaacaagaggaagatacagagaggacccaaattaatgttcttgcagtacaagccata acttccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagttagctgt ttggaacagcagccccgcaacaaagctttaaaagctctggacacgaggtttgggaggaag ctaagtgttatcaggggaattgttgaacaggaaatccaagcaatggtatctaagagagat aatattgctactcatcacttataccaagcttgggaccctgttccatcacttgctcctgct actacaggtgctcttataggccatgaaaaactcttactgcagatcaatactgaacgagaa ataggagatatggattataaactgggacaggtctctatacactccatatggttaggaaat aatatcactccattgagagaagaagagtggggtgaggatgaagaagatgagaacgacata cctgctccttcctcaccaccaacttctcctattaacaccaggaaacatcgggctggtgta gatatacattcttgttctcagttcttgcttgaactctacagtcagtggatattgccatca aaccctagcaagagaacaccagtcattttgattagcgaagtggtgcgatcactcctggca gtatcagacttatttacagaaaggaatcagtttgagatgatgtatacaacattgacagaa ttgcgaaaggtgcatccatcagaagatgagattcttatacagtatttgataccagccact tgtaaagctgctgctgttcttggaatggataaagctgtggctgagccggtaagtcgactg ctggaatcaaccctaagaagcacccatatgccaagtcggattggagctctgcatggaatt ctttatatccttgagtgtgacttgcttgatgagacagcgaagcaactcattccaattatc agcgagtatctgctctctaatttgagaggagtagcacattgtgtgaatatccataaccaa cagcacatcttggtaatgtgtgcagctgctttctatttgattgagaattacccacttgat gtagggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagt gatgaatcaacaccatccattatttatcattgtgtcctgagaggattagaacgactcctc ctttcagagcaactttctaggctggatagtgaatcgctagttaaactaagtgttgacaga gtgaatgtgcagagcccccacagagcaatggcagcacttggattaatgctgacttgcatg tacacaggaaaggaaaaaatcagccctagtcgtaccacagatgcaaatcctgctgctccc gacagtgaatctgtgatcgtagctatggaacgagtatctgtcctttttgataggatcagg aagggatttccttttgaagctagagtagtggctcggatccttccacagttccttgatgat tttttccccccacaagacgtaatgaataaagttattggagaatttttatccaatcagcag ccttacccgcaattcatggcaacagtagtttataaggtgttccagacactacatagcact ggacagtcctcaatggtccgtgactgggtgatgctgtctctttctaatttcacacaaaga acacctgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttccaccagt caatggatttcagcaattcttccccatattatcagcagaatgggaaaatcagagcaagtg gatgttaacatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaa ttagatcggagggcctttcagtcggtgtttgaggtggtggcatctccaggaactccatat catcgcttattaacttgtttgcaaaatgtccacaagatcacagcatgttga

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