Cariama cristata (Red-legged seriema): 104168399
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Entry
104168399 CDS
T08341
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1
KO
K26583
transcriptional-regulating factor 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccri03036
]
104168399 (TRERF1)
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
104168399 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
zf-C2H2_2
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
104168399
NCBI-ProteinID:
XP_009707280
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQQHQMNSLPSLNHSYGTSVMDAPQASPLSPQFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHVAVRNNLSNQSAMWSPLGQGESHDGYQYSYS
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHAESSMVDNSGDSALRQLL
SQKPAVEQQPVTSSVQRYQPVSQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQTHIQQMQSQQLLPQQMQHLQQTQYYTQPQQGHQRLSIQEIQQQQPTRQQQQRQ
CPMQIAQYYQTQPVMQQLQQQQQQMQLPLPPYHREPDPKTMHEPHQYSQDPSHPVQLIQL
GAVPQYCYQDPHEQYRHLYSQSLLQQQQDQQKQYLSESRVPSLNSHIGVTPPETAEDPTR
QEINSVGNAVPHRTLLPPSGVHLNNKSSQQDSPSATWPQQVQLSDSRLQPLSPEQSGQNR
ETLPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPKE
VDSLAPIVMPVSVPVKLLSPEPSTQPSASTATVKDKPANSVSDDEMPVLVKMTYSPPCSP
KVANPCSSSEISKKPHQSAIKLEDNFKPLQDKKKYRHRPEPLFIPPPSFNFSMSHSGAIL
YQSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHTQLPLTP
LTPTPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHK
ATLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKL
LLKRPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVE
YYYTWKKILRLGRKHRTRLERKREECLTSGEEEVLEEDEEIEDDRKEEREMQKSPDPPAI
PLVGPIDLPALQSLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKPRCTIPG
TKQKSGTQSGYCSIKSSPAHSTTSGETDPTTVFPCKECGKVFFKIKSRNAHMKTHRQQEE
QQRQKAQKAAVAAEMAATIARTTGPVEHSLIPLDHMSLVKHVENVGDIDDDVVQELGDVM
EENEVMDADLLLDDEDADLLQDDAEL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaatgagaacttgtac
taccaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgctccccaggcatcccctctctccccgcagtttccccaagattcaagagacagt
atagctttgcctgtaggttcaaaaagtcttgggtcaatggatacatctagacagaccagt
tggacacattctggctcaggaaaccatgtcgcagtgagaaacaatttgagtaatcaaagc
gcaatgtggagccccctcgggcagggggagtcccacgacggataccaatattcttattct
caacccagtgaaaatcgatcacaaaaaattaccagtggggtcctgcataaattggattcc
tttacacaagtattcgctaaccaaaatctgagaattcaagtcaacaacatggctcaagtt
ttacatgccgagtcttcgatggtggataattctggtgacagtgcactcaggcagctgctg
tcccagaagccagcagttgagcaacagcctgtaacttccagtgtacaaagataccaaccg
gtgtcacagcaaacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactatgactaccagcagcatttatcacaaatgcagatgcat
tctgcatttcagcaaggacagactcacattcaacaaatgcagtcccagcagctcttaccg
caacagatgcagcacttgcagcagactcaatactacactcagccgcagcagggacatcag
cggctctcgatacaggagatccagcagcaacagccaactcggcagcagcagcagcggcag
tgtcccatgcaaatagctcagtattaccaaacgcaacctgtcatgcagcagttacagcaa
cagcagcaacagatgcaattgccgcttcctccgtatcacagggaacccgatccaaagact
atgcatgaaccacaccagtactctcaggatccaagtcatcctgtgcagcttatccagttg
ggagcagtgcctcagtattgctaccaagatccccatgaacagtacaggcacttgtactcg
cagagtttactgcagcagcagcaggatcagcagaagcaatacctgagtgagagcagagtg
ccatctctgaactcccacattggcgtcactccaccagagactgcggaggatcccacacgg
caggagattaattccgtaggtaatgctgtccctcatcgaactcttttgccaccctcagga
gtccatctgaacaacaaaagctcgcagcaagactctcccagtgctacatggcctcagcag
gtgcaactgtcagacagcagactgcagcctctgtccccagagcaaagtggccagaacaga
gaaacacttcctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttgaag
gagtttaaaagtttgcctgctctaaatggtcacatgaggtcacacggaggagtaagagca
tctcctaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgcctaaagag
gtggatagcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacct
gagcccagcacgcagccctctgccagcacagccacagtcaaagacaagcctgccaactct
gtgtcagatgatgagatgcccgttcttgtgaagatgacttactctccaccgtgcagtcca
aaagtggccaacccctgctcatcctctgaaattagcaaaaaacctcatcaaagtgctata
aaattggaagataacttcaaaccattgcaggacaagaagaagtatcggcatagacccgaa
cctctcttcatacctcctccttccttcaacttcagcatgtcccactctggtgccatcctg
taccagagtcagcttcgctctccccgtgtcctcggagatcatctgctagaccggacgcat
gagctccccccttacactccgccaccgatgcttagtccagttcggcaaggctctggtctc
ttcagcagtgttatcacttcatctcatagcacctcgcatacccagctgccacttactcca
ctgacgcctactccacgggtgctcctgtgtcggtctaatagtattgatggaagtgtcatt
ccagtgacgcctgggcctggagaacagactgttgaaccacgaatcaatattgggtccagg
ttccaggctgatattcctgagctgcaggacagattgctaatggagaaagatgtgcacaag
gctactttggtttggaaaccatggccagaactggagaacaaagtcttccaacaaagagtg
gaagaccttttaaatatgagctgttccagtgtcttacctggtggaggaactaactcagaa
tatgctttgcactctctctttgaagcaaaaggagatattatggttgctcttgagaagctg
ctgttgaaaaggccagtgagattaaagtgtcatcctttggcaaattaccactacgctggc
tctgacaaatggacacatcaagaaaggaggctgttcaaagaggcattgtccacctacagc
aaagatttcatatttgtacagaaaatggttaagtctaagacggttgcacaatgcgtggaa
tactactatacctggaagaaaatcttgcgtttgggacggaaacacagaacacgtttagag
agaaaaagagaggaatgcctgacaagtggagaagaggaagtgttagaggaagatgaagag
atcgaggacgacagaaaggaagaaagggaaatgcagaagtctcctgacccaccagctatc
cctcttgttggacctatagatctgcctgcccttcagagtctttcgctttcttcatcctcc
ttcatctgtgaaatgccaaactgtggcgctgtgttcagttcccgacaagcgctaaatggc
catgctcgcattcatggaggtacgaatcaggtgacaaaaccacgatgcaccattccaggc
actaagcagaaatctggtacgcagagcggatactgctccatcaagagttcacctgcccac
agcacaacaagtggtgagaccgacccaacgacagtttttccttgcaaggagtgtggcaag
gtgtttttcaaaatcaaaagccgcaatgctcatatgaagactcacagacaacaagaagaa
cagcaaaggcagaaggctcagaaagctgctgtggcagcagaaatggcagccactattgca
agaactactgggccagttgagcatagtttgatccctctggatcacatgagtttggttaaa
catgttgaaaatgttggtgacattgacgatgatgttgttcaggagctgggtgatgtcatg
gaagagaatgaagtcatggatgctgaccttttattggatgatgaagatgcagatctactg
caggatgatgctgagttgtaa
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integrated database retrieval system
