Cariama cristata (Red-legged seriema): 104168634
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Entry
104168634 CDS
T08341
Symbol
PCDH20
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104168634 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccri01009
]
104168634 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccri04515
]
104168634 (PCDH20)
Protein phosphatases and associated proteins [BR:
ccri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104168634 (PCDH20)
Cell adhesion molecules [BR:
ccri04515
]
Cadherins
Protocadherins
104168634 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
104168634
NCBI-ProteinID:
XP_009707592
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
LSFTLASHGLGGQYVHLDNRSGELHTSAVEIDREALCVESSGTTIFGGAAAVSFSSPSSE
SCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPHFPVPHICLSVPENAPVNTRLAIEHPA
LDPDVGTNGVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGALDRETREEYVTVIIAED
GGSPPLMGSATLTIGISDINDNCPQFSDSQLNITLYGNSSLGTHVATVHAVDMDLGSNAQ
ITYSYSQKVPQPSRDLFHLDESTGAIKLSSKVDGDTPRLHRLIILGNGXPAVITVLVTII
KVMMRPPEVVPRFIANEVEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDGDGPFRL
SPYKPYNNEYLLETTKPLDYEAQQLYEISVVAWNSEGFHVNKIIKVQVLDDNDNSPVFSQ
QLIELSIEENNAPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFALDKTTGVLTVSTQL
DREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGE
IGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDG
GDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMN
AVIAYSIIGRRGPRPESFRIDSKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTV
MVNLFVNDTVSNESYIESLLRKEPDVSIEEKQPQISIEPTHKKMETASCMPTLVALSIIS
LGSIALVTGMGIYICLRKGEKHHRADENLEVQIPLNGRINLHMLEKKPVEISNI
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
ctctccttcaccctggcctcccatggcttggggggacagtatgtgcatctggacaaccgc
tctggggagctgcacacctcagctgtggagatcgaccgggaagctctgtgcgtggagagc
agtgggaccaccatcttcgggggagcagctgctgtgtccttttcctcaccctcatccgaa
tcatgtctgctgctgctggatgtgctggtgctgccacaggagtacttccggctagtgaag
gtaaaaattgctatccgggatgtcaacgacaatgcacctcactttcctgtgccccacatc
tgcctctcggtgcctgagaatgcacctgtgaacacccgcttggctatcgagcaccccgcc
cttgaccccgatgtgggcaccaatggtgtccagacctaccgcctgcgagataactacggt
gtcttcaccctggatgtggaggagaatgagagcggggagaggactccctacctgattgtt
atgggagctctggacagggagacacgggaggagtatgtcacagtcatcattgctgaggat
gggggcagtcctccactcatgggcagtgccaccctcactattggcatcagcgacatcaat
gacaactgcccccagttcagcgactcgcagctcaacatcaccctttatgggaattccagc
ctagggacacacgtggccactgtccatgcggtagacatggaccttggatctaatgcccag
atcacctactcctacagccagaaagtcccccagccatccagagacttgttccatctggac
gaaagcacaggagccatcaagctctccagtaaagttgatggggacactccaaggctccac
aggctgatcatattaggcaatggtnntcctgctgtgatcacagtgctagtgaccatcatc
aaagtcatgatgaggccacctgaagtggtccctcgtttcatagctaatgaagtggaaggg
gtggtgtacttaaaggaactggagcctatcaacacaccgatagcattttttaccatcaaa
gaccctgatgaaaaatacaaagtcaattgctatttggatggtgatgggcctttcagactt
tcaccatacaagccatacaacaatgaatacctgttagagaccacaaagcctttggactat
gaggcacagcagctgtatgaaatctctgtagttgcgtggaactcagaaggatttcatgtc
aacaaaataatcaaagtacaggttctggatgacaatgacaactcgccagttttctctcaa
cagctgatagaattatccattgaagagaacaatgctcccaatgctttcttgaccaaactg
catgctaccgatgctgacagtggagaaagagggcaagtgtcctatttcttaggtcctgat
gccccttcctattttgctttagataaaaccacaggagttcttacagtttccactcaactg
gacagagaagaaaaagagaaatacagatatactgtcaaagcagtagactctgggttccct
ccaagggaatcaattgcaactgtcaccatcaccgtattggataaaaatgataatagtcca
agattcatcaataaggatttcagctttttcgtgccagaaaactttccaggttttggtgaa
attggagttataagtgtcacagatgctgatgcagggcaaaatggatgggttgccctttca
gttctgaatggaagtgatattttcgtcatagatactggaaaaggagttttgagagctaaa
gtctccctggacagagagcagcaaagctcctacgttctgtggattgaagcagttgatggc
ggtgatcctgccctgtcttctacagcaaaaataactatccttcttctggacataaatgac
aacccccctttggtcttgtttcctcagtctaatatgtcctatttgttggtccttccttct
acccttcctggctctcccatcactgaggtatatgctgtcgataaggacactggcatgaat
gcagtcatagcttacagcatcataggaagaagaggccctcgaccggagtcatttaggatt
gattctaaaactggtaatatcaccttggaagaatcactgatgcaaaatgactatggcctc
tatcggctgcttgtaaaagtgagtgatcatggctatccagaacctctccattccaccgtc
atggtgaaccttttcgtcaatgacactgttagtaatgagagctacattgaaagtttgtta
agaaaggagcctgatgtcagtatagaagaaaagcaaccgcaaatatccatagagcctaca
cataaaaaaatggagacagcatcctgcatgcctaccttggtagctctgtcaataataagc
ttgggttcaattgctttagtaacagggatgggcatttacatctgtctaagaaaaggggaa
aagcatcacagagcagatgaaaacttggaagtacagatcccattaaatggaagaattaac
ctgcacatgttggagaagaaaccagtggagatttctaacatttga
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integrated database retrieval system
