Cariama cristata (Red-legged seriema): 104168650
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Entry
104168650 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccri03021
]
104168650
Transcription machinery [BR:
ccri03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
104168650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Motif
Other DBs
NCBI-GeneID:
104168650
NCBI-ProteinID:
XP_009707615
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MPVWYLTNIGTEQKPVKVSCRNRNRGQELFGLLDLVKRCVGADQFNSCYVAELTGIKWRR
YNFEGHGDCGPIISAPAQDDPILLSFIRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNL
VDVIHRELHMVEEGLWENGLSYECRTLLFKAIHNLLERCLMDKNFVRIGKWFIRPYDKDE
KPVNKSEHLSCAFTFFLHGESNVCTSVEIAQHQPIYLINEEHIHMAQSSPSPFQVLVSPY
GLNGTLTGQSYKMSDPATRKLMEEWQYFYPMVLKKKEGVKEEEELGYDNDFPVAVEVIVG
GVRMVYPSAFVLISQSDIPMSQNAASTGGHINVGQQGLGSLKDPASTCGMPLTPPTSPEQ
AVMGESGCSQSNISHSAVQEGTVSVHSPKKSGKITPKFHNHMVHRVWKECILNRSQSKRN
QITTANLEEEVPNNTVSWDFVDPVQRVSCSCSRHKVFKQRCAAGSSRPPTINQPGFSMGT
SSSSSLPPPASSKHKTTERQEKGDKLQKRPMMPFHHRPSVTEELCMEQDTAGQKLGXXXX
XXXXXXEPSXEVPNSRKYEKPLSIPARNPSKQINMNPMDSPRSPTSPLPPTLSPQPRGQE
AENLDPPSVPVNPALYGSALELQPLPSLDDRTVLVGQRLPLMAEVSETALYCGIIQNKES
LDMWRTYSVPSSDNPEFRPPDLPSERYDAKMEINSDSTALKRLLAQPNKRFKILEEQKPV
QALNYLDPLPLIQQPGEGLGDASDPYTFEDGDIKYSFTGNKKCKLGAEKDPLKKIKSEDG
IGTKEIPTTGHSTPVPDGKDAMSIFSSAPKTDTRQDNAAGRVGSGSLTQVTDLAPSLHDL
DNIFDNSDEDELGAVSPALRSSKMPTVGSEERPVGKDGRTAVPYPPTVADLQRMFPTPPS
LEQHPAFSPVMSYKDGISSETVTTLGMMESPMVNMVPTQLAEFKMEVEDGLGSPKPEEIK
DYSYVHKVPSFQPFVGSSVFAPLKILPSQCLLPLKIPDACIFRPSWAVPPKIEQLPLPPA
ATFIRDGYNNVPSVGSLADQDYLQMNTPQMNTPVTLNSTAPASNSGAGVLPSPATPRFSV
PTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGSPASTPSTTRPLSSVEPATVQPIPEAHS
LYVTLILSDSVLNIFKDRNFDSCCICACNMNIKGADVGLYIPDSSNEDQYRCTCGFSAIM
NRKLGYNSGLFIEDELDIFGKTSDIGQAAERRLMISQSNLISQMGEGARRTQEPPMSLLL
LLQNQHTQPFTSLSCLDYMSSNNRQTLPCMNWSYDRLQADSNDSWIECFNALEQGRQYVD
NPTGGKVDEALVRSATVHSWPHSNVLDISMLSSQDVVRMLLSLQPFLQDAIQKKRTGRTW
ENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLPIPTLLVGYDKDFLTISPFSLPFWERL
LLDPYGGHRDVAYIVVCPENEALLDGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRV
GKTVAQKLTDELVSEWFNQPWGTEECDNHSRLKLYAQVCRHHLAPYLATLQLDSSLLLPP
KYQTPAPASQTQTVPGNTGPVPSNSTCLSAAGAAPTGNSFNSTPSAGTTSLPAGSSSSSG
SSVPQLSASSATPSVNQMTTTSTPGFSGNIGSGQNTSTGGNTADRSQGSTGPGGDTESGQ
NLPQQQQEGQEGVTERERIGIPTEPESADSNAYPPAVVIYMVDPFTYTADEESASTNFWL
LSLMRCYTEMLDNLPENMRNSFILQIVPCQYMLQTMKDEQVFYIQHLKSLAFSVYCQCRR
PLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPFILAPIKDKQTELGETFGEAS
QKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCIVNIDLPNRSRRSKLSARKIGLQKLW
EWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECSLQTISKQLKEVCRMCGISAA
DSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNLQSSQLNTPQDASCTHILVFP
TSATIQVAPANYPNEDGFSPTN
NT seq
6187 nt
NT seq
+upstream
nt +downstream
nt
atgccagtatggtacctgactaacataggaacagaacaaaagcccgtcaaagtgtcctgt
cgcaaccgcaaccgtggccaggagttgtttggcctgctggatttggtgaagcgttgtgtt
ggtgctgaccagtttaacagctgctatgttgctgaactcacaggcatcaaatggcgtagg
tacaattttgaaggtcatggggactgtggccctatcatttcagccccagcacaggatgat
ccaattctgctcagcttcatccgctgcttgcaggccaatttgctttgtgtgtggcgccgt
gacgtcaaaccggattgtaaggagctatggatattctggtggggagatgaaccaaatctt
gtagatgtgatacatcgtgaactgcacatggtggaagaaggattgtgggagaatggactt
tcctatgagtgtaggaccctgctcttcaaagcaattcataatcttctggaaaggtgcttg
atggataaaaacttcgtaagaattggaaaatggttcataagaccttatgacaaggatgaa
aagcctgttaataaaagtgaacatttgtcatgtgccttcacattctttcttcatggggaa
agcaatgtgtgcacaagtgtggagatcgctcaacaccagccaatctacctgatcaacgaa
gagcatatccatatggcccagtcctcaccctcgccgttccaagttttggtgagtccttat
ggtttaaatggtacgctcacggggcagtcatataagatgtccgacccagcaactcgtaaa
ttgatggaggaatggcagtatttttaccctatggtgctgaagaaaaaagaaggtgtgaaa
gaggaagaagagttgggctatgacaacgatttccctgtggcagtggaagtcattgttggt
ggtgtaaggatggtatatccttcagcctttgttctcatctcccagagtgacatccccatg
tcacagaacgctgccagtactggaggccatataaatgtgggacagcaggggcttggaagc
ctgaaggatcctgctagtacttgtgggatgccgctcactccgcccacttctccagagcag
gccgttatgggagaaagtggatgctctcagagcaatatcagccattcagctgtacaggag
gggacagtcagtgtacacagtccaaagaaatcaggcaagattactccaaaatttcacaac
catatggttcaccgtgtctggaaggaatgcattctcaacaggtcacagtccaagaggaat
caaattacaactgcaaatttggaagaggaagttcctaacaatactgtttcttgggatttt
gtggatccagtccaaagagtcagttgttcttgttccaggcacaaggttttcaaacagcgt
tgtgctgccggctccagccgtcccccaacgataaatcagccaggattcagcatgggaaca
tcatcgtcttcatcattgccacctcccgcctcttcaaagcacaaaacaacagagagacag
gaaaaaggagataaactgcaaaaaaggcctatgatgccgtttcaccatcggccctctgtg
actgaagagctatgcatggagcaggacacagcggggcagaaactgggatnnnnnnnnnnn
nnnnnnnnnnnnnnnnnngagccctcctaagaagtccctaattccagaaaatacgagaag
ccgctatctatacctgctagaaatccaagcaagcaaatcaatatgaatcctatggattca
ccccgttcccctacttcccctctgcctcccacactcagcccccagccgagaggtcaggaa
gccgagaatctggaccctccttccgtacctgtaaacccagcactctatggcagtgcgctg
gagcttcagccgttgcccagcttagatgataggacagtccttgttgggcagaggttacct
ctgatggcagaggtcagtgagacagcattatactgtgggataattcagaacaaggagtca
ctagatatgtggaggacctatagtgtcccatcaagtgacaatccagagttcaggccgcca
gatcttccgtctgagaggtatgatgccaagatggaaataaactcggacagcactgcgttg
aaaaggctcttagcacaacctaataaacggtttaaaattttagaagagcagaaaccagtg
caggcactgaactaccttgaccccttgcctctgatacaacaacctggagaaggcttggga
gacgctagtgatccttacacttttgaagatggtgatataaagtacagcttcactggcaat
aaaaaatgcaaacttggcgctgagaaagatcctttgaaaaagatcaagtcagaagatgga
attggtaccaaggaaatccccacaacgggtcattctacaccagttcctgatggaaaagat
gccatgtctattttcagttctgctcctaagactgatacccggcaagacaatgctgcaggc
cgagtaggctctggtagcctcacacaggtgacggatctggctccatcgcttcatgatcta
gataacatctttgataattcagatgaagatgagcttggtgctgtatcgccagctcttcgg
tcatcaaaaatgcccacagtagggtctgaggaacgccctgtagggaaggatggtagaaca
gcagtaccttacccaccaactgtggcagatctccaaaggatgttcccaacaccaccttcc
ttagaacaacaccctgccttctccccggtaatgagttataaagatggaataagttcagag
actgtaactaccttgggaatgatggaaagtcctatggtcaacatggttccaacacagctt
gctgagtttaaaatggaggtggaagatggattaggtagccctaagcctgaagaaattaag
gattattcatatgtgcacaaagttccatcatttcagccttttgtgggctcctccgtattt
gctccactgaagatactgccaagtcagtgcctcctacctctgaagataccagatgcctgc
attttcaggccttcctgggctgttcctcctaaaattgaacaacttcctttgccgcctgca
gccactttcattagagatggctacaacaatgtgcctagcgttgggagtttggccgaccaa
gactatcttcagatgaacactcctcagatgaatacaccagtgacgctaaatagtactgct
ccggccagcaacagtggagcaggagttctgccgtcaccagcaactccccgcttctctgtc
cctaccccacgcactcccaggaccccaaggactcctagaggcgggggtactgcgagcggt
caaggatctgtaaaatatgacagcacagatcaaggttcacctgcttctaccccttccaca
acacgaccgcttagttctgtggagccagccactgttcagccgatcccagaagcccacagc
ctgtacgtcaccttgattctttcagactctgtgttgaacatcttcaaagaccgtaacttt
gatagttgttgtatatgcgcctgtaatatgaatattaaaggtgcagatgtcggattatac
atcccagattcatctaatgaggatcagtaccgttgcacctgtggctttagcgctattatg
aaccgcaaattaggttacaactcggggctcttcattgaggatgagctggatatttttggc
aagacctcagacattggccaagctgcagaaagacgactgatgataagtcaaagcaacttg
atctctcagatgggagagggagctagaaggacccaggagcctccaatgagcctcctcctc
ctcctccagaatcagcacacacagcctttcacatctctgagctgcttggactatatgtcc
tccaacaatcgtcagaccctcccgtgtatgaactggagttacgacagactgcaggcagac
agtaacgactcctggatagagtgcttcaatgcccttgagcaaggccggcagtatgtggac
aaccccactggtggaaaagtggatgaagccctcgtaagaagcgccactgtgcactcttgg
cctcacagcaatgtgttggatatcagcatgctctcctcccaggatgtggtgcgcatgctg
ctgtcgctgcagccctttctccaggatgccatccagaagaagcgaacaggaaggacctgg
gagaacatccagcacgtgcagggaccactcacctggcagcagttccataagatggcagga
cggggaacctatggctctgaggagtctcctgagcctctgccgatcccgactttactcgtg
ggttatgacaaggacttcctgacaatctctccattctccttgccgttctgggagaggctg
ttgctagacccatatgggggccatcgggatgtcgcctatatcgtggtgtgtccagaaaat
gaggccttgctcgatggagccaaaactttcttcagggacttgagtgctgtatacgagatg
tgtagacttggccagcacaaaccaatctgcaaagtgttacgtgatgggattatgcgggtg
ggaaagactgtggcacaaaagctaacggatgagctcgtgagcgaatggtttaaccagcct
tggggcactgaggagtgcgacaatcattccagactcaaactttacgcgcaagtttgccgg
caccacctagcaccttacttagccaccctccagcttgacagcagcctactgctaccacct
aagtaccaaaccccagcgccagcaagccagacacaaacagtacctgggaacaccgggcct
gtaccctcaaattcaacatgtctgtcagctgctggggcagcaccaacaggcaattctttt
aactccacacccagtgctgggaccactagccttccagcaggaagcagttcatcctccgga
tcctctgtgccacagctgtcagcatcttctgcaacacccagcgttaaccagatgaccacg
acctctactccagggtttagtgggaacattggttcagggcaaaacaccagcactggggga
aacacagcagaccgctcgcaaggaagcacaggtcctggaggagacacagaatcaggtcaa
aacttaccgcagcagcaacaagaaggacaggaaggtgttacagagagggagagaatcggg
attcccactgaaccagagtctgcggacagcaacgcctatcctccagcagtggtcatctac
atggtggatccttttacctacactgcagatgaagaatctgcctcaaccaacttttggctg
ttaagtctgatgagatgctacacagaaatgttggataacttgcctgaaaatatgaggaat
tctttcattctccagattgtgccttgccagtacatgctgcagacaatgaaggatgaacag
gttttctacattcagcacttgaagtctttggcgttctcagtgtactgccaatgcaggagg
ccgttgcccacgcagattcacatcaagtctctgacaggctttgggccagctgccagcatt
gagatgaccctcaaaaatcctgagaggcccagcccaatccagctatactcacctcctttc
atattggcacccatcaaagacaaacagacagagctgggagaaacatttggagaggccagt
cagaaatacaatgtgctttttgttggatattgtttgtctcacgatcagcgttggcttctg
gcatcctgcactgaccttcatggtgaattgctggaaacctgcatagttaacattgattta
ccaaacaggtcaaggaggagcaagttgtccgcacgtaaaattggtctgcagaagctatgg
gaatggtgcatcggtatcgtacagatgacatcactgccgtggagagttgtaattgggcgg
ctcggccgcctaggccatggggagttaaaagactggagtatcctccttggggaatgttcc
ctgcagacaatcagcaaacaactgaaggaggtgtgccgcatgtgtggcatctccgcagcg
gactccccttctatcctcagtgcctgtttagttgctatggagccacaggggtcatttgtt
gtgatgccagatgctgtcactatgggatcagtgtttggccggagtactgcgctgaatctg
cagtcatctcagctgaatactcctcaggacgcctcctgtacacacatcctggttttccca
acctctgctactatccaggtagcaccagcaaattaccccaatgaggatggattcagccct
actaatg
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