Cariama cristata (Red-legged seriema): 104169498
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Entry
104169498 CDS
T08341
Symbol
NFKB2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04010
MAPK signaling pathway
ccri04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104169498 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104169498 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccri03000
]
104169498 (NFKB2)
Transcription factors [BR:
ccri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104169498 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
Ank
RHD_dimer
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
104169498
NCBI-ProteinID:
XP_009708728
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
CLDGIDYDDFNFGSHMMEQKEPLMETVEGPFLVIIEQPKQRGFRFRYGCEGPSHGGLPGA
SSEKGRKTYPTVKICNYTGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKD
MTAQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSHLLTEAELREIELEAKELKKVMDLS
IVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYL
LCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQ
LKRSGNLSFPYSPGLAYNSIYSPGPHPVGGYQGGVQMKGPEAEGPGRAPAESTYCKELQK
HAHLCQLWMLAWRRNAHALLDYSVTADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTA
VIKQLIEVIVSIPSQQIINISNNLQQTPLHLAVITKQPQVVQLLLQARADPTLLDRYGNS
LLHLALQAGDEEMLRTLLAHLGSAAPYLLHLPNFHGLLPVHLAVKAKSXSCLDLVVRKGA
DVNAVERQGGRTPLHLAVEMENLNMATHLVKKLGADVNSRTFARNTPLHLAAGLGSPTLT
KLLLKAGADVLCENDEPTSPSSSEASSDTDADPEEQELAMELGELAPAVEHSTNPSPPTQ
GHGQPRHRQRRCHTPLDLTRSQKVREILLQASQQGPEMELPAAPQPGEQPLSPQKHNAWA
GQRQRLNQDCSGSDWIELAKRLGLCSLVETYKDTPSPSVSLLRSYELAGGSLGGLLEALD
SMGLHKAVRMLHKTEALDKLQSTELKEDSAYGSESVEEEQVPALALKPGGELPHSQQPQV
H
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
tgcctggatgggattgactacgatgacttcaatttcggctcccacatgatggagcagaag
gagcctctgatggagacggtggaaggtcccttccttgtcatcatcgagcagccaaagcag
cgggggttccggtttcggtatggctgtgaaggcccttctcacggcgggctgccaggagcc
tccagcgagaaggggcgcaagacctatcccaccgtcaagatctgcaactacacagggatg
gcccggatcgaggtggacctggtgacacacagcgaccctcctcgtgtgcatgcccacagc
ctggtgggcaagcagtgcaacgaggccggcaactgcgttgcgatcgtgggacccaaggac
atgacggctcaattcagcaacctgggtgtgctccacgtcaccaagaagaatatgatggag
atcatgaaggaaaagctgaagcagcagaagatgcgtaacaggagccatctgctgacggaa
gcggagctgcgtgagatcgagctggaggcaaaggagctgaagaaggtgatggacctgagc
atcgtgcgattgcgcttcactgcctacctccgcgacagcagtgggaacttcacgctggcc
ctccagcctgtgatctcggaccccatccatgacagcaagtccccaggagcctccaacctc
aagatctcgcggatggataagacggcaggctccgtgcggggaggggacgaggtctacttg
ctatgtgataaagttcagaaagatgacattgaagtgcgtttctacgaggatgacgagaac
ggctggcaggcctttggggacttctcccccactgacgtgcacaagcagtacgccatcgtc
ttccgtacgcccccctaccacaagcccaagatcgaccgtcccgtcaccgtcttcctgcag
ctgaagcggagtgggaacctcagcttcccctactctcctgggctggcctacaacagcatc
tactcgcccggcccccaccctgtggggggctaccaggggggcgtgcagatgaagggccct
gaggcggaggggcctgggagagcacctgcggagagcacgtactgcaaggagctgcagaag
catgcccatctctgccagctgtggatgctggcctggcgtcgcaatgcccatgccctgctg
gactactcggtcaccgccgacccccgtatgctgctggcagtccagaggcatctggctgca
tcgcaggatgagaacggagacacgcctttgcaccttgccattatccatgagcagacggct
gtgatcaagcagctgattgaggtcattgttagcatccccagccagcagatcatcaacatc
tccaacaacctgcagcagacaccactgcatctggcagtcatcaccaagcagccccaggtg
gtccagctcctgctgcaagcccgcgccgaccccacgttgctggaccgctatggcaattcc
ctgctgcacctggcactccaggctggcgatgaagagatgctgaggacactgttggcccac
ctgggctcagctgccccttacctgctccacctgcccaacttccatggcctcctgcctgtg
cacttggccgtgaaggcaaagagtnnttcctgcctggacctggtggtcaggaagggagcg
gatgtgaacgcagtggagcggcagggtgggaggaccccactgcacctggctgtggagatg
gagaacctgaacatggccactcacctggtgaagaagctgggagcagatgtcaacagccgg
acctttgccaggaatacccccttgcacctggctgctggcctgggctcgccaaccctgacc
aaactgctcctcaaagctggggcagatgtgctgtgtgagaacgatgagcccacaagccca
tcctcgtcggaggccagcagcgacacggacgctgaccccgaggagcaggagctggccatg
gagctgggagagctggccccggccgtggagcacagtaccaaccccagcccccccacgcag
gggcacgggcagcccaggcacaggcagcgccgctgccacacgcccctggacctgactcgg
agccagaaggtgcgggagatcctgctgcaggcctcccagcagggccccgagatggagctg
cctgctgccccccagccaggtgagcagcccctctccccccaaaagcacaatgcctgggca
gggcaacgccagcggctgaaccaggactgcagcgggtcggactggattgagctggccaag
cgcttggggctctgcagcctcgtggagacctacaaggataccccctcacccagtgtcagc
ctcctgcgcagttatgagctggcagggggcagcctgggggggctgctggaggcactggac
tccatggggctccacaaggccgtgaggatgctccacaaaactgaggcgctggacaagctg
caaagcacagagctgaaggaagacagcgcctatggcagtgagtcagtggaggaggagcag
gtgcctgcgctggccctgaagccggggggcgagctgccccacagccagcagccgcaggtg
cactga
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