Chrysoperla carnea: 123290715
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Entry
123290715 CDS
T09255
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccrn04990
]
123290715
Domain-containing proteins not elsewhere classified [BR:
ccrn04990
]
Other domain-containing proteins
Tubby family proteins
123290715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_ELP1_1st
SOCS_box
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_1st
DUF3527
Motif
Other DBs
NCBI-GeneID:
123290715
NCBI-ProteinID:
XP_044726928
LinkDB
All DBs
Position
1:complement(10407684..10469104)
Genome browser
AA seq
1440 aa
AA seq
DB search
MHLHFERSVNAKCDCSILSLTWMGKVPDELPEDEGWKLNRTNYYQEGWLATGNVRGIVGV
TFTTSHCKKNVDFPLRTNYNLRGHRSEVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWS
IELINDRNTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLESTITCGIWTP
DDQQVYFGTTSGQIVVMDVHGAMVSQVQLSSEVGISSMAWSCEKFKMEENDDNDNSATNS
SEKKFVLAVSLQNGYIFLLKTFDDVSPIQLDTGLQGTSLCMEWSNSRELLAVAGTTILPE
GHKSPLTVQQPLQYNNLLKFYTDTGILVYTITIPFNQCPVSALTWGHNDKRLFMATGSQV
HIAWVSRRVASLQLMCRLMVQSRLRSESQLHQLPLPARIRNLIGNLFAQTIRCCVPSPLA
LREFVSRPPNGSVRLHCTMIRHDDDSNLSSGTCYTLYLEYLGGLVPLLKGKRTSKIRPEF
VIFDPQVEGKLXNLFEVFEFVDDPYFTNVFSLEQCSDYCECAKSSGSSQSTNGSGGSGGA
IPSDSSDSDREEGCTSSPRMQRRRRRATTHKSRSRTVLGDRQLPPNETNEFEDLAYIDTL
PEHVRLVEVTSNIWGTKFKIHGLASSVPANLGQVTYKTSLLHLQPRQMTLVMTELRDDIP
PGPDPNFNPNLFSEDEEEVITTNDRPTFKTAHTDVAPPIAPMSPRGSRLARPKSQIPPQF
LNPEQPPNVIPALARAESYEDEFPYVDLTEMVNFCEALRTNNSTTVTTTGSSNSSGISML
YCPSNTNNRNGSTSSGRHAVSPLCCEGSVPALQSPKNAVAPSDIIFDRPPAQTLLSYSTT
DFSNSIQQVKSNFEHSTAQRNGVSLTLNLEKTTATFKKKLDSNSILDSKKNYAEIEPIKK
PRNCDLATPSSSTSQQNIPSTTGTKHTRRTFCNKNSPSGNQIGIAASKWCTGKSDELRFI
DEDSIIENMEPVRLPNAGTGMRRTMTVMASPPCSCTPNPGDAMVRSCSVGYLDLVDAQLV
PCDIALAMLRKDTPKRLVLVNRKTRMKRSKQKQQIDKKENMKKSPNLGTCGKSKSLDSSD
MATPTSIDIANISNLPKHKEEDPIERFKIAPPSPQTIEIIKSPSKLKEPTKLSFFTTSKT
PVMRRKTQTDDRKTILESRTTPSSPIISRNRSHSETTRNSGVTTLIDSRNTTTSNEPSFI
RTNSNDIPFAQKLTDSPNGRSATSLHSQALTTLENLLNRIRELDDRSTVPSSPELSTRLP
RSSPASPAPSKKGKRNQSASPIRRHFMNSPLLGRRNRKNKNIESSDDEVNNASDRDEVFS
GKNYKDLETFQKAQLRQKLKRGKIEPNGINCSTQSVPVRREFVMHNKAPMWNENSQVYQL
DFGGRVTQESAKNFQIEFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRLK
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacatttcgaacgaagtgttaatgcaaaatgtgattgttcaatattatcgttg
acatggatgggtaaagtgcctgatgaattaccagaggatgaaggttggaaattaaatcgt
acaaattattatcaagaaggatggttagcaacaggaaatgttcgtggaattgttggtgtt
acatttacaacaagtcattgcaaaaaaaatgtggattttccattgcgaacaaattataat
ttacgtggtcatcgatctgaggtaatattagtcaaatggaatgaaccttatcaaaaatta
gcatcatgtgacagttctggtataatatttgtttggattaaatatgagggtcgctggtcc
attgaattaattaatgatcgtaacactcctgttactcatttttcgtggtcacatgacggt
cgcatggcactaatatgctatcaagatggattcgttcttgtgggctctgtcgctggacaa
cgatattggtcatctatgcttaatttggaatcaacaataacatgtggtatttggacacca
gatgaccagcaagtgtattttggtacaacatctggtcaaattgttgtaatggatgttcat
ggtgctatggtttcacaagtccagctcagctctgaagttggcataagttcgatggcatgg
tcttgtgaaaaatttaaaatggaggaaaatgatgataatgataattctgcgactaattca
agtgaaaaaaaatttgtattagcagtaagtttacaaaatggttatatatttttattaaaa
acatttgacgatgtatcaccaattcaattggacactggactacaaggaacgtcattatgt
atggaatggagtaattctcgtgagctgttagccgttgcgggtacaacaattttaccagaa
ggacataaatcaccacttacagtgcaacaaccattacaatacaataatttgttaaaattt
tatacggatacaggaattttagtttacaccatcacgataccatttaaccagtgtccggtg
tctgctttaacatggggtcataatgataaacggttatttatggcaacaggaagccaagta
catattgcttgggtttcacgacgtgtggcatcattacaattaatgtgccgtttaatggta
caaagtcgtttacgatctgaatctcaattacatcaattaccactgccagctagaatacga
aatttgattgggaatctttttgctcaaacaatacggtgctgtgtaccaagtccgttagct
ttacgtgagtttgtatcacggcccccaaatggttccgtccgattacattgtacaatgatc
cgtcatgatgacgattcaaatttgtcatctggcacatgttataccctgtacttagaatat
cttggtgggctggtgccattactgaagggaaaacgtacaagtaaaattagaccggaattt
gttatattcgaccctcaagttgaaggtaaactataaaatttatttgaagttttcgaattt
gtagatgatccatattttactaacgttttttcattagaacaatgttcagattattgtgaa
tgtgcaaagagttctggtagcagtcaatccacaaatggtagtggtggaagtggtggggca
ataccatcagattcatctgattcagatcgagaagagggctgtacaagttcaccaagaatg
caacgtaggcggcgacgggcgacaactcataaatcgagatcgcgaactgttttaggtgat
agacagctcccgcctaatgaaacaaatgaattcgaagatttagcttacatagatacttta
ccagagcatgtacgtttagtggaagtaacatcaaatatttggggtactaaatttaaaatt
catggattagcaagttcagttccggcaaacttaggtcaagtgacgtataaaacttctctt
cttcatcttcaaccacgacaaatgacgttagtaatgactgaacttagagacgatatacct
ccaggacccgatcccaatttcaacccaaacttattttcggaagatgaggaagaggttata
acaacaaatgatcggccgacatttaaaactgcacatacagatgttgcaccgccaatagca
cctatgtcaccgcgtgggagtcgattagcacgtccaaagtcccaaatacctcctcaattt
ttaaatcccgaacaaccaccaaatgtgattccagcattggctcgggccgaatcgtacgag
gatgaattcccttacgtggatttaacagaaatggtaaatttttgtgaagcactacgaaca
aataattctacaactgtcaccacaactggtagttcaaatagttcaggaatctcgatgttg
tattgcccatcaaatacgaataaccgaaatggttccacatcatcggggcggcatgctgtg
tcaccattatgttgtgaaggttcagtaccagctttacaatcaccgaaaaatgcagttgcc
cctagtgatattatttttgaccgtccacctgcgcaaacattactttcatattcaacaacc
gacttttcaaattctattcaacaagtgaaatcgaattttgaacattctacagcgcaacgg
aatggtgtttcattgaccttaaatttagaaaaaacgaccgcaacgtttaaaaagaaatta
gatagtaattcaattttagatagtaaaaaaaattatgctgaaatagagccaattaaaaag
ccaagaaattgtgatttagctacgccgtcgtcatcgacatcccaacaaaacattccatca
acaacaggaacaaaacatacacgccgaaccttttgtaataaaaatagtcccagcggaaat
caaattggaattgcagcatccaaatggtgcacaggaaaatcagatgagttacgatttatt
gatgaagattcaataattgaaaatatggaaccagttcgcttacctaatgcaggaaccggt
atgcgtcgaacaatgactgttatggcttcacccccgtgttcttgtacaccaaatccgggt
gatgctatggtacgcagttgtagtgttggttatttagacttggttgacgcacaattagta
ccatgtgatatagcattagctatgttacgcaaagatacaccgaaacgcttagtattagtt
aatagaaaaacacgtatgaaacgttcgaaacaaaaacagcaaattgacaaaaaagaaaat
atgaaaaaatctcctaatttaggtacttgtggaaaatctaaaagtctagattccagtgat
atggcaacgccaacatcaattgatatagcaaatatttctaatttaccgaaacataaagaa
gaagatcccatagaaaggtttaaaatagccccaccttctccacaaacaatcgaaataatt
aaatcgccatcaaaactaaaagaaccaacaaaattgagtttttttacaacttccaaaaca
ccagtaatgcgtcgaaagacacaaacagacgatcgtaaaaccatattagaatcacgaaca
actccgtcaagtccgattatttcacgaaatcgtagtcattctgaaaccacacgaaatagt
ggagttacaacattaattgattctcgaaataccacaacttctaatgaaccatcatttata
cgtacaaattcaaatgatattcctttcgcccagaaattaacagatagtcctaacggtcgt
tcagctacgtcgttgcatagtcaagcgttaaccacattagaaaatttattaaatcgaatt
cgtgaactagacgatcgttcaactgttccatcttcaccagaattatccacacggttacca
agaagctcgccagcatcaccggctccatcgaaaaaaggaaaacggaatcaatcggcatca
ccgatacgtcgacattttatgaattcaccgttattaggtagacgtaaccgtaaaaataaa
aatattgaaagttctgacgatgaagtgaacaatgcatctgatcgtgatgaagtatttagt
gggaaaaattataaagatttagaaacatttcaaaaagcacaacttaggcaaaagttaaaa
cgtggaaaaattgaaccaaatggtattaattgttcaacacagtcagtacccgtacgacga
gaatttgttatgcataacaaagctccaatgtggaatgaaaatagtcaagtataccaatta
gattttggtgggcgagttacacaagaatctgcaaaaaattttcaaattgaatttcgtgga
aaacaggtgatgcaatttggaagaattgatggaaatgcgtacaccttagattttcaatat
ccattttcagctttacaagcttttgccgttgctttagccaacgtcacacaaagattaaaa
taa
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