Chrysoperla carnea: 123291545
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Entry
123291545 CDS
T09255
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123291545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123291545
Spliceosome [BR:
ccrn03041
]
Complex A
U1 snRNP components
U1 related factors
123291545
Complex B
123291545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
SL4P
HVO_2833_C
GIY-YIG_UvrC
GIDA_C_1st
Motif
Other DBs
NCBI-GeneID:
123291545
NCBI-ProteinID:
XP_044727796
LinkDB
All DBs
Position
2
Genome browser
AA seq
795 aa
AA seq
DB search
MQEPPPAINPVNFVGPPPMGTPPIIPPPLLPPAMGAFPVPPILPPFNVPPPGVGSFPATA
TTIPETMTTTPLPIDNNVAPPTLWTEHKAPDGRTYYYNSQTKESSWEKPDALKTPAELLL
SQCPWKEYTSDNGKIYYHNMTTKESRWVIPPELEEIKKRIAAEEKLSAPKENIALNSTTP
AVPNTLTNNSKSSALESAMAATLAAIAIPAPPVKQEDEPQSTQNIIQPEENNKSATPEPK
IEFKDKKEAMEAFKELLKEKNVPSSATWDQCVRLIGSDPRYVTLKRLNEKKQIFNAYKTQ
KQKEEREEQRLKAKQAKEALEKFLLNHDQVTSHTKYYRLDEMFANLEIWRCVPDSDRRDI
YDDVLFSLAKREKEEAKALKRRNMKKLAEVLDNMTDVTFQTTWTEAQALLLENETFKHDV
DLLAMDKEDALVVFQEHIRVLEKDDADEREREKKRHKRQARKNRDNFLALLDLLHEEGKL
TSMSLWVELYPTISADLRFSAMLGQTGSTPLDLFKFYVEDLKARFHDEKKIIKDILKEKG
FEVKVNTTFEDFATVVCEDKKSATLDAGNVKLTYNSLLEKAEAKEKERLKEENRKYKKLE
TAFKNMLKDLNIDHNLDYDDIRSKIERESEFLAVSNESDRIQIYKDFQHEAEESCSHLHS
RSKKSKKSKKSKKRSMRSESEHSSSHNTSSDKEIVSPMVEDDRSTTKHSKSSRKQKHKSR
KRSRSQSLASRRRNSNGDYSSESPESPSRSHHHHRASSPPSASVLPTRGEGELSETELEK
QRALLLAQLKEPESE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaccgccaccagcaatcaatccagttaattttgtgggaccaccgccaatgggt
acaccaccaataattccaccaccgttattgccgccggcaatgggtgcatttcctgtgccc
cccatactaccgccttttaatgtaccaccaccaggtgttggatcattccctgcaactgca
acgacaattccagaaactatgactacaactcccttacctattgataacaatgttgcacca
cctacgttatggacggagcataaagcacccgatggtagaacctattattataattcacaa
acaaaagaaagctcatgggaaaagccagatgcattaaaaactccagcagagttacttcta
tcacaatgtccttggaaggaatataccagcgataatggtaaaatctattatcataatatg
actacgaaagaatctcgttgggtcattccaccggaattagaagaaattaagaaacgtatt
gctgctgaagaaaaattatcggctccaaaagaaaatatagcattaaattcaactacacca
gcagtaccgaatacattaacgaataatagtaaatcatcagctcttgaatcagcaatggca
gccactcttgcagctattgccattcccgcaccccctgtaaaacaggaagatgaacctcaa
agtacacaaaacataattcaaccagaagaaaataataaatctgctacacccgaaccaaaa
attgagttcaaagataaaaaagaagcaatggaagcattcaaagaattattaaaagagaaa
aatgtcccatccagtgctacatgggatcaatgtgtacgattaatcggttcagatccacga
tacgtaacattaaaacgtttaaatgaaaagaaacaaatttttaacgcatataaaacacag
aaacaaaaagaagaacgtgaagaacaacgtttaaaagcaaaacaagctaaagaagcgtta
gaaaagtttttattaaatcatgatcaagttacatcacatacgaagtattatcgtttagat
gaaatgtttgcaaatttagaaatatggcgttgtgtaccagattcagatcgacgtgatatc
tatgatgatgtactattttcattagcgaaacgtgagaaagaagaggcgaaagcattaaaa
cgtagaaatatgaaaaaattagctgaagttttggataatatgactgatgtcacgtttcaa
acaacatggacggaagcgcaagcgttgttattagaaaatgaaacgtttaaacatgatgtg
gatttattagctatggataaagaagatgcattagttgtattccaagaacatattcgtgta
cttgaaaaagatgacgccgatgaacgtgagagagagaaaaaaagacacaaacgacaagct
cgaaagaatcgagataattttttggctcttttagatttattacacgaagagggtaaatta
acgtcaatgtccttgtgggtagaattatatccaacaatatcagcggatttacgatttagt
gcaatgttaggacaaacgggatcaacaccacttgatttatttaaattttatgtggaagac
ttgaaagcacgttttcatgatgagaaaaaaattattaaagacattttaaaagagaaaggc
tttgaagtgaaagtaaatacaacattcgaagattttgctacagttgtttgcgaggataaa
aaatcagcaaccttagatgcaggcaatgttaaattaacatataattcacttttagaaaag
gctgaagcaaaagaaaaagaacgtcttaaagaagaaaatagaaaatataagaaattagaa
acagcatttaaaaatatgcttaaagatttaaatattgatcataatttagattatgatgat
attcgttcaaaaattgaaagagaatcagaatttttggctgtttcaaatgaaagtgatcga
attcaaatttataaagacttccaacatgaagctgaagaatcttgcagtcatttacattca
cgttcaaaaaaatccaaaaagtcgaaaaagagtaagaaacgttcgatgcgttcagaaagt
gaacacagttcaagtcataataccagctccgataaagagatagtctcaccgatggtcgaa
gatgatcgtagtactactaagcacagtaaaagttcgcgaaaacaaaaacataaaagcagg
aaacgaagtagatcgcaatcgttggctagtcgtcgtcgaaacagtaatggcgattacagt
tccgaatcacccgagtccccgtcaaggagccatcatcatcatcgtgcatcttcgccacca
tctgcatcggtattacctacacgtggtgaaggagagttgtctgaaacggaattggaaaag
caacgggcattgttacttgcacaattaaaagaacccgaatcagagtga
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