Chrysoperla carnea: 123291654
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Entry
123291654 CDS
T09255
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03013
Nucleocytoplasmic transport
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123291654
03015 mRNA surveillance pathway
123291654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123291654
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123291654
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123291654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
DUF6819
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
123291654
NCBI-ProteinID:
XP_044727949
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Position
2:25218752..25222922
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AA seq
475 aa
AA seq
DB search
MSGTVNWAKYVDEQEHITKKVSNIALKSNSPPLKSPTTDDPSSDDAPDKCNPAEASLLLK
VIRKGLVECKTDIEVQRRDPSSPLFSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFTLAMLSRVDVTKDYPQVLCLSPTYELAIQTGEVAAK
MSQFCPEIRLKYAVRGEEVARGSKLTDHIIIGTPGKVLDWGVKLKVFDLSKITVFVLDEA
DVMIATQGHQDQCIRIQKCLSPSCQMMFFSATYDQEVMDFAGVIVPNALIIRLLREQESL
DNIKQFYVKCQNAQEKYAAITNIYGVIGVGQAIIFCHTRKTAAWLAEKMTKDGHAVAILT
GDLTVEQRIAVLDRFRAGKEKVLITTNVMARGIDVEQVTIVVNFDMPMDVNRKADCETYL
HRIGRTGRFGKPGIAINLIDSAESMAICNAIEEHFGKKIKYLDTEDSDEIEKIGT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaacagttaattgggcaaaatatgtcgacgaacaagaacatattacaaaaaaa
gtttccaacatagctttaaaaagcaattcacccccattaaaatcacccacaactgatgat
ccatcatcggatgatgctccagataaatgtaatcccgccgaagctagtttattattaaaa
gtaattcgtaaaggtttggtagaatgtaaaacagatattgaagtacaaagaagagatcct
tcatcaccgctcttttcagtcaaaacatttgaagcacttcatttaaaaccaaacttatta
aaaggagtgtatgcaatgggattcaatgcaccatcaaaaattcaagaaactgccttacct
acattattggctgatccaccgcaaaatatgatagcacaatctcagtctggtactggtaaa
acagcagcatttacactagccatgctaagtcgcgttgatgttacgaaagattatccacaa
gtgttatgtttgtctcctacatatgaattagccattcaaacgggagaagtagccgcaaaa
atgtctcaattttgtccagaaattcgtcttaaatatgcagttcgtggagaagaagttgcg
cgtggttcaaaactaacggatcatattattattggaacgccaggcaaggttttggattgg
ggtgtaaaactgaaagtgtttgatctttcaaaaataacagtgtttgttttggatgaagct
gatgttatgattgcaacccaagggcatcaagatcaatgtattaggattcaaaaatgctta
tcacccagctgtcaaatgatgttcttttctgccacttatgatcaagaagtaatggatttc
gctggagtcattgtaccaaatgctcttattatacgattactaagagaacaagaaagttta
gacaacattaaacaattttatgtaaaatgtcaaaatgcacaagaaaaatatgcagctatc
acaaatatttatggcgtgattggagtcggtcaagctattatattttgtcatacaagaaag
acagctgcttggttagctgaaaaaatgacaaaagatggacatgctgttgctattttaact
ggtgatttaactgttgaacaaagaattgcagttttagatagatttagagctggcaaagaa
aaggtcttgattacgactaacgttatggcacgaggtattgatgttgaacaagtaacaatt
gttgtgaattttgatatgccaatggatgtgaatcgtaaagcggattgtgaaacgtactta
catcgaattggtcgtaccggtcgttttggtaaacctggtatagcaattaatttaattgac
tcagctgaatcaatggcaatatgtaatgctattgaagagcattttggaaagaaaattaaa
taccttgatacagaggattcagatgaaattgaaaagattggtacataa
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