Chrysoperla carnea: 123291826
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Entry
123291826 CDS
T09255
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03013
Nucleocytoplasmic transport
ccrn03015
mRNA surveillance pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123291826
09122 Translation
03013 Nucleocytoplasmic transport
123291826
03015 mRNA surveillance pathway
123291826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123291826
03041 Spliceosome [BR:
ccrn03041
]
123291826
03009 Ribosome biogenesis [BR:
ccrn03009
]
123291826
03012 Translation factors [BR:
ccrn03012
]
123291826
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123291826
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123291826
mRNA cycle factors
Stress granule specific factors
123291826
Spliceosome [BR:
ccrn03041
]
Complex C
Other components
EJC/TREX
123291826
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
90S particles
Helicases
123291826
Translation factors [BR:
ccrn03012
]
Eukaryotic type
Initiation factors
eIF-4
123291826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
Cas3-like_C_2
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
123291826
NCBI-ProteinID:
XP_044728184
LinkDB
All DBs
Position
2:67162921..67166979
Genome browser
AA seq
401 aa
AA seq
DB search
MSQGSRRVIQDDLSNVEFETSEDVEVISAFDTMGLREELLRGIYAYGFEKPSAIQQRSIK
PIMKGRDVIAQAQSGTGKTATFSISILQMIDTTVRETQVLCLSPTRELATQIQKVILALG
DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPVRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNIADLV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaggctcacggcgtgtaattcaagatgatttgtctaatgttgaatttgagaca
agtgaagatgtggaagttatttctgcattcgatacgatgggacttcgtgaagaattattg
cggggtatttatgcatacggatttgaaaaaccatctgcaattcaacaacgttcgatcaaa
ccaataatgaaaggacgtgatgtaattgcccaggctcaatctggtaccggtaaaactgca
acattttccatttctatactacaaatgattgatacaacagtacgagaaacacaagtttta
tgtttatcaccaaccagagaattagcaacacaaatacaaaaagtgatattggcacttggt
gattttatgaacgtacaatgtcatgcttgtatcggtggcacaaatttaggtgaagatata
cgtaaattagattatggacaacatgttgttagtggaactcctggtcgagtgtttgatatg
attagacgtcgagttttgcgtacaagaaacattaaaatgttggtgttggatgaagctgac
gaaatgttaaacaaaggattcaaagaacaaatttatgatgtatatcgttatttaccacca
gcaacacaagtcgtattaatttccgctactctaccccacgaaatattagaaatgacttca
aagtttatgacagatcctgttcgaattttagtaaaacgtgatgaattgacacttgaagga
atcaaacaatttttcgtggctgtagaacgtgaagaatggaagtttgatacgctctgcgat
ttatacgatacattaacaattacacaagctgttattttttgtaacacgaaacgtaaggtg
gattggttaacagaaaaaatgagagaagcaaattttacagtcagctcaatgcatggtgat
atgcctcaaaaagaaagagataatatcatgaaggaatttcgatctggacaaagtcgtgtt
ttaatcacaacagacgtatgggcacgaggtattgatgtacaacaagtatcattagtaatc
aattatgatttaccaaataatcgtgaattgtatatacatcgtattggtcgatcaggtcgt
tttggacgtaaaggtgtcgccattaattttgtgaaatcagatgatattagaatattacgt
gatattgaacaatattattcaacacaaattgatgaaatgcctatgaatattgctgattta
gtttaa
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