Chrysoperla carnea: 123291935
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Entry
123291935 CDS
T09255
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123291935
03009 Ribosome biogenesis [BR:
ccrn03009
]
123291935
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123291935
Spliceosome [BR:
ccrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123291935
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
90S particles
Helicases
123291935
Pre-60S particles
123291935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_30
Motif
Other DBs
NCBI-GeneID:
123291935
NCBI-ProteinID:
XP_044728337
LinkDB
All DBs
Position
2:complement(67572088..67576640)
Genome browser
AA seq
628 aa
AA seq
DB search
MALQDKILLRKIKNCEKKKKLKLLQKKEQQQKEKASKSNENEENVQTQPKLIEIGDKRKR
EDDAPVKKKKRKKNKNKQNDNTEDENENNENQESEENDLDDNEKPAHSQDLGEKLPGSKV
TLEILSDRKFDSLKDVVCEHTLKAIEDMEFTTMTEIQAKSIPPLLEGRDLVAAAKTGSGK
TLAFLIPAIELIYKLKFMPRNGTGVIIISPTRELSMQTFGVLKELMKYHHHTYGLVMGGA
SRQTEAQKLSKGINILVATPGRLLDHLQHTPDFLFKNLQCLIIDEADRILDIGFEDEMKQ
IINMLPKRRQTMLFSATQTKKIEALTTLALKKEPVYVGVHDDNVEATVSGLEQGYVVIPS
DKRLLVLFTFLKRNRNKKVMVFFSSCMSVKFHNELFNYIDLPVMNIHGKQKQTKRTATYY
QFCNADTGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSRGHALLF
LRPEELGFLRYLKQARVPLNEFEFSWSKISDIQLQLEKLIQKNYFLNLSAKEAFKGYVRA
YDSHHLKTIFDVETLDLQKVGSSFGFTVPPAVDLKVGFKKNDRPRKRTGGGGYGYYKNLN
APAGGKKEVEKAKFFRQPKNKGNRQFSR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcaagataaaattctattaagaaaaattaagaattgtgaaaaaaagaaaaaa
ttaaaactattacaaaagaaagaacaacaacaaaaagaaaaagcttcaaaatcgaatgaa
aatgaggaaaatgttcaaactcaaccaaaattgatagaaattggtgataagagaaagcgt
gaagatgatgctccggttaaaaaaaaaaaacgcaagaagaataaaaataaacaaaatgat
aacacagaagacgaaaatgaaaacaatgaaaaccaagaaagtgaggaaaatgatttagat
gacaatgagaaaccagctcattcacaagacttgggtgaaaaattaccaggatcaaaagta
actttagaaattttaagcgatcgcaaatttgattcattaaaagatgtagtctgtgaacat
acattgaaagcaattgaagatatggaatttacgacaatgacagaaattcaggcgaaatcc
ataccgcccttattagaaggccgcgatttagtggcagctgctaaaacgggttcgggtaaa
acattagccttcttaattccagcaatagaattgatatataaattaaaatttatgccacga
aacggtaccggtgtcataataatttcacccacacgagaattatcaatgcaaacgtttgga
gttttaaaagaactaatgaaatatcatcatcacacgtacggtttagtaatgggaggagct
agtcgtcaaactgaagcacaaaaattatcaaaaggaattaatattttggtagccactcca
ggaagattactcgatcacttacaacacactcccgattttctattcaaaaatttacagtgt
ttaattattgacgaagcagatcgaattttggatattggtttcgaagatgaaatgaaacaa
attattaatatgctcccaaaaagacgacaaacaatgttattctcagccacacaaacgaaa
aagatagaagcattaacaacattagcattgaaaaaagaaccagtctatgttggagtacat
gatgataatgttgaagcaactgtgtcgggattagaacaaggatacgttgttataccatct
gataagcgtttattagtgctattcacatttttgaaacgtaatcgtaataaaaaagttatg
gtatttttcagttcatgtatgagtgttaaatttcataatgaattatttaattatatcgat
ttaccagttatgaatattcatggcaagcaaaagcaaacaaaacggacggccacatattat
caattttgtaatgcggatactggaatcttattatgcacagatgttgctgccagaggctta
gatatacccgccgttgattggattgtacaatatgatccaccagatgatccaaaagaatat
atacatcgagttggacgtactgccagaggtgaaggttcccgtggtcatgctttgttattt
ttacggcctgaagaattgggatttttacgttatttaaaacaagcacgtgtaccattaaat
gaatttgaattttcatggtctaaaatttcagatatacaattacaattagaaaaattgata
cagaaaaattactttttaaatttatctgcaaaagaagcttttaaaggatatgttcgtgct
tacgattcacatcatttgaaaacgatattcgatgttgaaacgttagatttacaaaaagtt
ggatcatcgtttggattcacagtacctcctgctgtcgatttaaaggttggttttaagaag
aatgacagaccgcgtaaacgaactgggggtggtggatatggatattataaaaatttaaat
gctcctgcaggtggtaaaaaagaagtagaaaaagcaaaatttttccgacaacctaaaaat
aagggaaatagacaatttagtcgttaa
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