Chrysoperla carnea: 123292116
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Entry
123292116 CDS
T09255
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123292116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123292116
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123292116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
123292116
NCBI-ProteinID:
XP_044728605
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All DBs
Position
2:66195516..66201025
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AA seq
634 aa
AA seq
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MAFNFGSSQTQPGLNFGANTQQNKPAFGATGSTGFSFGQSTQQQTPSFGFGATTATTSAA
PNFGFGSNFGAPASTATSGFGSLGAPTSTSTGFGGFGTTATSTPGTGFSFGGTPATTATS
GFNFGGTATTTASTGFGGFGGLSTQGTQQQSTGLFSGFGTTTPATQSGSLFGGLGTTTNT
GSTFGGGLGTSFGQKPGTSFSFGSTLGGGTSTLGGGFGAGTTFGSTLGQPQQQQQQQPSP
DPNQTLINAVLNVRIFGDERDTIIAKWNLLQASWGVGKGYYSTNQPPVEFTPENPFCRFQ
AIAYSAMPGKDNKDGEVVMVFNKKENDVKAQLSQIQQQITQQVLGNKPELKITVDEIKAL
NENTTQVCLYVEEKNNLGTIRKIPANEFANFLNQNMQKQMLTNIGVIKLFANVKPDAEQI
QEYLKSPPNGIDPRIWKQAQEDNPNSTKYIPVPIIGFNNLKWRLQTQENETALHRAYLNQ
VTDDIAQLKQKQAASIAQITEYKRKFSDLQHRVLKILVKQEMYRKVGMALQPEEEHLRIQ
LENMQAQISVPTQFRGRLTELLAHIRILRCGDEPITGTGAQERYTISPLVQEDIKQFLSL
EHIGINHLIETIHKDQHTLNEIKKEMLNILQQSS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaattttggatcatcacaaactcaaccaggtttaaattttggagcaaatact
caacaaaataaaccggcctttggggccactggtagtactggattttcatttggtcaatct
acacaacaacaaactccatcttttggatttggggcaacaacagctactacgtcagctgct
ccgaattttggttttggttctaattttggagcacctgcatctacagccacatccggattt
ggttcgttaggagctcctacaagtacatcaactggttttggaggatttggcaccacagct
acatcaacacccggtactgggtttagttttgggggaactccagctactacagctacgagt
ggtttcaattttggtggtacagctactacaacagcatctacagggtttggaggatttggt
ggtttatcaacccaaggaactcaacaacaatcaacaggattattcagtggatttggaact
accactccagccacacaatctggatctttatttgggggcttagggaccaccacgaacaca
ggatcaacatttggaggaggtttaggtacatcgtttggtcaaaaaccaggcacttcattt
agttttggaagtacactaggaggtggcacaagtactttaggcggtggatttggagcagga
actacttttggaagtactttagggcaacctcaacaacagcaacaacaacaaccctcacct
gatcccaaccaaacacttataaatgctgttttaaatgttcgaatatttggagatgaacgt
gataccataattgctaaatggaatttactacaagcttcatggggtgttggcaaaggctat
tatagtacaaatcaacctcccgtcgaatttacaccagagaatccattttgtcgctttcaa
gctattgcctacagtgcgatgccgggtaaagataacaaagatggtgaagtagttatggtt
tttaacaaaaaagaaaatgatgtaaaagcacaattatcacaaattcagcaacaaataaca
cagcaagtattaggcaacaaacctgagttaaaaattactgtggatgaaattaaagcatta
aatgaaaatactacacaagtgtgtctttatgttgaagaaaaaaataatttaggcaccata
cgaaaaataccagcaaatgaatttgcaaatttcttaaatcaaaatatgcaaaaacaaatg
ctaacaaatatcggagtaattaaattatttgcaaatgttaagcctgatgcagaacaaatt
caagaatatttaaaaagcccaccaaacggaattgatccaagaatatggaaacaagcacaa
gaggataatccaaattcaacaaaatatataccagtaccaataatcggttttaataattta
aaatggcgtttacaaacacaagagaatgaaacagccttgcatcgtgcatatttaaatcaa
gttacagatgatattgcccaattaaaacaaaaacaagcagcatctattgcacaaattact
gaatataaacgtaaattttcagatttacaacaccgtgttttaaaaattttagtaaaacaa
gaaatgtatagaaaagttggaatggctttacaaccagaagaagaacatttacgtattcag
ttagaaaatatgcaagcacaaatatcagttcctacacaatttcgtggtcgcttaaccgaa
ttacttgcacatatacgtatattacgttgtggtgatgaaccaataactggtactggagca
caagaacgttatacaatcagccccttggtacaagaagatattaaacaatttttaagttta
gagcatattggtattaatcatttaattgaaacaatacataaagatcaacatacattgaat
gaaattaaaaaagaaatgttaaatattttacaacaatcttcctag
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