Chrysoperla carnea: 123293139
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Entry
123293139 CDS
T09255
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03008
Ribosome biogenesis in eukaryotes
ccrn03013
Nucleocytoplasmic transport
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123293139
03015 mRNA surveillance pathway
123293139
03008 Ribosome biogenesis in eukaryotes
123293139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123293139
03009 Ribosome biogenesis [BR:
ccrn03009
]
123293139
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123293139
mRNA cycle factors
Stress granule specific factors
123293139
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123293139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
TAP_C
Tap-RNA_bind
LRR_4
LRR_8
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
123293139
NCBI-ProteinID:
XP_044729790
LinkDB
All DBs
Position
2:22629791..22638132
Genome browser
AA seq
630 aa
AA seq
DB search
MSKKFGKNKNWNNHYDARNKNFGANDNERSENIRRVSFKQNNRTNRKQKQRDWDFAIKSH
LDDEDIPMTGGSSGSQGNFHPIGNNRRRGGNRVHSPAPRGGGHAGNTGKTRKLLEGPTSW
YKVTIFSGALYDKQDLLRILLGQLEHPESFIPINWRNNGPDAVFFVDDFKIATKIFNSDK
KIVLPDGRRLGVRVFHALPQIEINDRLKEKMKLAMAKRYNPATKALDLTKFHVDAELQDV
FCALFRAIIMNAAIDVIAENIPDLEALNLCQNRLYVIDHLSNLAKKLPNLKILHIGNNEI
RDIRSLDKLKGLQLVDLVLDGNPLCDKFKDQSVYVSEVRKRFPKVIKLDGVDLPPPIVFD
VTEECKLPPTNQTFLCNDAGGDIVRVFLKQYFEIYDSNNRQPLLQAYHENGMFSMTMGYP
HGLTQKNSPPLNWYQLDNRNLLRVQNPERRNKLLKQGQLSIVSFLAEMPKTQHDMNSFKV
DLSFFTPQFFMLNVSGIFKEIGGGFKTPPLRAFTRALIIVAANSGFCIINEAIYITNATD
EQAKDAFKMPNPIIPTSPQVSSPTVPAGSPPELDDATKQQMVHTMAQQSGMNLDFSTKCL
QETNWDFQRAVVIFTELHKQGGIPPEAFVK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaagtttggtaaaaataaaaattggaataatcattatgatgcacgcaataaa
aattttggtgctaatgataatgagcgatcggaaaatattcgacgtgttagtttcaaacaa
aataatcgtacaaaccgaaaacaaaaacaaagagattgggattttgccataaaaagtcat
ttagatgatgaagatattcctatgaccggtggtagcagtggttcacaaggtaattttcat
ccaattggaaataatagaaggcgtggtggtaatcgtgtacactcaccagccccacgtggt
ggtggccatgccggtaacactggtaaaacaagaaaactattagaaggaccaacaagctgg
tataaagttacgatattttctggagcactctatgataaacaagatttattacgaatatta
cttggacaattagaacatcctgaatcatttatacctataaactggcgaaataatggtccc
gatgctgtattctttgtggacgattttaaaattgccacgaaaatatttaattcagataag
aaaatcgttttaccggatggacgtcgtttgggtgttcgagtatttcatgcactaccacaa
attgagatcaatgatcgattaaaagagaagatgaaattagcaatggcaaaacgttataat
ccggcaacaaaagcattagatttaacaaaatttcatgtggatgcagaattacaagatgta
ttttgtgcattgtttcgtgcaattattatgaatgcagcaattgatgtaattgcagaaaat
attccagatttagaagcattaaatttatgtcaaaatcgactttatgtgatagatcattta
agcaatttggcaaagaaattacctaatttaaaaatattacatattggaaataatgagatt
cgtgacattcgaagtttggataaattgaaaggattgcaacttgttgatttggttttggat
ggtaatccactctgtgacaaatttaaggatcaaagtgtttatgtcagcgaagtgcggaag
agatttcctaaagttattaaattggatggagttgatttgccaccaccaattgtgtttgat
gtcactgaagaatgtaaattaccaccaaccaaccaaacatttttatgcaacgatgctgga
ggcgatattgttcgagtatttttaaaacaatactttgaaatatatgatagtaacaatcga
caaccattattgcaagcataccatgaaaatggtatgttttctatgacaatgggctaccca
catggtttaacacaaaaaaattcaccaccattaaattggtaccaattagataatcgtaat
ttactacgtgtacaaaatcctgaacgacgaaataaattattgaaacaaggacaactttcg
attgtttcatttcttgcggaaatgccaaaaactcaacatgatatgaattcgtttaaagtt
gatctttcatttttcacgccacaattttttatgcttaatgtcagtgggatattcaaagaa
attggtggaggatttaaaacaccaccgttacgagcatttactagagctttaataatagtt
gctgccaactctggattttgtataataaacgaagctatttatataacaaatgcaacagac
gaacaagcaaaagatgcttttaaaatgcccaacccaataattccaacaagtcctcaagtg
tcatcacctacagttccagcaggatcaccaccagaactagatgatgccactaaacagcaa
atggtccatacaatggcgcaacaatcaggaatgaatttggacttttccacaaagtgttta
caagaaacaaattgggattttcaaagagcggtggtgatatttacagaattacacaaacaa
ggaggcataccaccagaagcttttgttaaataa
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