Chrysoperla carnea: 123293284
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Entry
123293284 CDS
T09255
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123293284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123293284
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123293284
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
123293284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
123293284
NCBI-ProteinID:
XP_044729983
LinkDB
All DBs
Position
2:complement(54727839..54730386)
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AA seq
287 aa
AA seq
DB search
MALNSLCEAEKIYALHGVQDDFRVDGRQRDDYRPMELETEFLPQAMGSARLRLANTDVIV
GIIAEVEKPQIDRPNEGKIEFFVDCSANATPAFEGRGGEQLATEISNCLKVAFSSSQAFN
LTSLCVVPKHVCWKLNIDILILECGGNLFDAVSLAVKAALFNTKLPSIVKSEVDGPEIYI
EISDNPYEYRSFDIKDIPIMVTLCKIGEHCVVDPSSDEEQCCSCSIVLAISGERICSVIK
QGAGSFHPITLIESLEFGKTIASTLDQALLDALERESKVDNRQAVRF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaattctttatgtgaagctgagaaaatttatgctcttcatggtgttcaagat
gattttcgagtggacgggagacaacgagacgattatcgtcccatggaactagaaacagaa
ttcttacctcaagctatgggatcagctcgtttacgattagctaataccgatgtaattgtt
ggtataattgctgaagttgaaaagccccaaatcgatcgtccaaacgaaggaaaaattgaa
ttttttgttgattgttctgcaaatgccacaccagcctttgagggtcgagggggagaacaa
ttagctacagaaatttcaaattgtttaaaagttgcatttagctcatcacaagcatttaac
ttaacatcattgtgtgtagttcccaagcatgtttgctggaaattaaatattgatattttg
atcttagaatgcggaggtaatttattcgatgcggtatcgttagcagtcaaagcagcttta
tttaacactaagcttccatcaattgtaaaatctgaagtggatggtcctgaaatatatatt
gagatatcagataatccgtacgagtatcgttcatttgatattaaagatatcccaattatg
gtaactttatgtaaaattggtgaacattgtgtagtggatccttccagtgatgaagaacag
tgttgttcctgttcgattgtgctagctatatcgggtgaacgtatttgttctgttattaaa
caaggtgcgggtagttttcatccgataacattgattgaaagcttagagtttggaaaaact
attgcaagtaccttagatcaagccttattggatgcgttagaacgtgaaagtaaagtagat
aatcgtcaagctgttagattttaa
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