Chrysoperla carnea: 123293307
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Entry
123293307 CDS
T09255
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123293307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123293307
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123293307
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123293307
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
123293307
NCBI-ProteinID:
XP_044730018
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All DBs
Position
2:33772057..33774060
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AA seq
198 aa
AA seq
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METDEPLICLPGQRLSILDNKHVSGSGTYGRQGYIYSMLAGIVKVVEKDETEIIEVHCSN
EQTLVPAPGDIVTAKVILINQRFCKCIIKCIGDVVLNRTYRGILRKEDVRANEKDKVDMY
KSFRPGDIILARVMPITEVHTFHLTTAENELGVAIALSSNGVPMVPISWTEMQCPETLVK
EFRKVAKVVPENINSLTQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgacgaaccactaatatgtctacctggacaaagattaagtattttagataat
aaacacgtatcgggatctggtacttatgggcgacaaggatatatctattcaatgttagcg
ggaattgtcaaagttgttgaaaaggatgagactgaaattattgaagtacactgcagtaat
gaacaaactttagtacctgcaccaggtgacatagtcactgctaaagtgatattaatcaat
caacgtttttgtaaatgtattattaaatgtatcggtgatgttgtattaaatcgtacgtac
cgaggaattttgaggaaagaagatgtacgtgctaacgaaaaggacaaagttgatatgtac
aaatcatttagaccaggcgatattattttagcaagagttatgccaattacagaagtacat
acatttcatttaacgactgcagagaatgaattaggtgttgcaatagcattatcatcgaat
ggtgtgccaatggtaccgattagttggacggaaatgcaatgtcctgaaacactggttaaa
gaatttagaaaagttgcaaaagttgtacctgaaaatattaattccttgacacagtaa
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