Chrysoperla carnea: 123293406
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Entry
123293406 CDS
T09255
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03013
Nucleocytoplasmic transport
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123293406
03015 mRNA surveillance pathway
123293406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123293406
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123293406
mRNA cycle factors
P-body specific factors
123293406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
CTD12
Motif
Other DBs
NCBI-GeneID:
123293406
NCBI-ProteinID:
XP_044730151
LinkDB
All DBs
Position
2:complement(32942157..32946436)
Genome browser
AA seq
1119 aa
AA seq
DB search
MEQSEQIEGNIECQNDAANEKDFVLTYIEETEQRLAYKAAVRKKNQNVQNCYPPDEYFSK
LDSNLKKNTTFVKKLKTFSASQLDGLLKDLSVLNLTKYISEVAAALTEAKLKMTDISNAV
QLCSVLHQTYSEFHTHFFENWSKVLSFKSGDKITNPSKLRVDLRFYGELVSFGIFTNKLG
LPLLGNALTFLINMDKEEHCNISIILSFCKHCGEDYAGLVPRKIRLLANKYNLEIPRSDL
LTPDKQSNVRVLLKDYYTSLCKHVLNDYFEIQTFQNQNKRILQTKGELNHERKERLEILQ
NAFDKLMVATQSFSEILDEDLPVLPEEKVEKIDDEIGMKISCNDTDDINVPSEVWDDEDT
KNFYTDLLDLHEFLPNSYVKTVTEPTDTITEEQLDSDVIEDFEQEEINDPEETVVEEELE
PINTNISNKILLEAFLNNLQNCVNREMIDSSVVDFVMNLNTKHNRRKLIRTLFGVARTRL
DLLPFYARFAATLYSVMPEIGTELCQMLKQDFKYHVRKKDQINIESKIKVVRYIGELVKF
NLYSKMEALYCLKVLLHDFNHHHIEMACNLLEVCGRYLFCHKDSHQRTKVYLQQMMRKKS
VMALDSRYVTQIENAYYFVNPPENLQTTKKVRPILHEFIRKLLYQELQKNNTDKVLRIMR
KLDWENEEVAAYAIKCLTFAHHVKYLNIRCLANLLAGLVAYQEFVGTQVIDGVLEDIRMG
MEMNHPKLNQRRVAMVKYLGELYNYRLIESGDIFKVLYSLITFGVSLDYNVTSPLDPPEH
LFRVRLTCVLLDTCGQYFNGGSSKKKLDYFLIFFQNYYVFKKCDPIWTTENPFPVDVDYM
FRDCLRSLRPKIYFYNDYKEAQEAVEALRKNFAQFLNIEVNEEHTENNPNLGTIQEQEEV
DIVSDAQDHTTTEDESGYPESDIDSDKMEENEISDLEAANDIVPVAPATVKCPEDDEFLA
ALDKMVVDNMQDRLRDSVKPTQVDISVPMHIKSSGLKKTYQILKEEELALSSPKENTTKQ
FVLMLRKGHKQQYKSFEAPMDSELALNLRNQEEALREEKERVKRLTLNITERLEEEDYQE
MLATQQRPQTTSLNRERRKYQHPKGAPDADLIFGPKKVR
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatcggaacaaatagaaggtaatattgaatgccaaaacgatgcagcgaatgaa
aaagattttgttctgacatacatagaagaaacagaacaacgattagcttataaagcagcc
gttcgtaaaaagaatcaaaatgttcaaaattgctatccacccgatgaatacttcagtaaa
ttagattcaaatctaaaaaagaatacaacatttgtaaaaaaattaaaaacattctcagca
tcacaactagacggtttattgaaagatttatcggtattaaatctaacaaaatatatatca
gaagttgcagcagccctaactgaagccaaattaaaaatgactgacatcagtaatgctgta
caattatgtagtgtattacatcaaacatactcagaatttcatacacatttttttgagaac
tggtcaaaagtgttaagttttaaatcaggtgataaaataacaaatccaagtaaattacgt
gtagatttacgtttttatggtgagttagtaagttttggtatatttacaaataaacttgga
ttgccgctattaggaaatgcgttaacatttttaataaacatggacaaagaggaacattgt
aatatatccataattctaagtttttgtaaacattgtggcgaagattatgcaggtcttgta
ccgcgtaaaatacgtttattagcaaataaatataatttagaaataccacgaagtgatcta
ttaacaccggataaacaatcaaatgtacgggttttgttaaaagattattatacatcgtta
tgtaagcacgttttaaatgattattttgagatacaaacatttcaaaatcaaaataaacgt
attctacaaactaaaggggaattaaatcatgaacgtaaagaacgtttagaaatattacag
aacgcttttgataaattaatggttgctacacaaagtttctcggagatattagatgaagat
ttaccagtgttaccagaggaaaaagttgagaaaatcgatgatgaaattggtatgaaaatt
agttgtaatgatacggatgatataaatgtaccatcagaagtttgggatgatgaagacacc
aaaaatttttatacagatctcttagatttacatgaattcttaccgaattcgtatgtgaaa
accgttacagaaccgactgatacaataaccgaagaacaattagattcggatgtaattgaa
gattttgaacaggaggaaattaatgatcccgaagagacagttgttgaagaggaattggaa
ccgattaatacaaatattagtaataaaatattattggaagcatttttaaataatttacaa
aattgtgttaatcgagaaatgattgatagttctgttgtcgattttgtaatgaatttaaat
acaaaacataatcgtcgtaaattaattcgtacactatttggtgtagctcgtacacgtttg
gatttattaccattttatgctcgttttgcagccacgctgtattcggttatgcctgaaatc
ggtacagaattatgtcaaatgttaaaacaagattttaaatatcatgttcgtaaaaaagat
caaattaatattgaaagtaaaattaaggttgttcgatatattggggaattagtgaaattt
aatttgtattcgaaaatggaagcgttatattgtttaaaagtactattgcatgattttaat
catcatcatattgaaatggcttgtaatttattagaagtttgtggtcgatatttattttgc
cataaagattcacatcaacgaaccaaagtgtacttacagcaaatgatgcgtaaaaaatct
gtaatggcattagattcacgttatgttacacaaatagagaatgcatactattttgtaaat
ccaccagaaaatttacaaactaccaaaaaagtacgaccaattttacatgaatttattcga
aaattattatatcaagaattacaaaagaataatacggataaagttttgagaattatgcgt
aaattagattgggagaatgaagaagttgctgcttacgcaataaaatgtttaacttttgca
catcatgtgaaatatttgaatatacgatgcttggcaaatttattagctggtttggttgca
taccaagaatttgttggtacacaagtaattgatggtgtgttagaagatatacgtatgggt
atggaaatgaaccatccaaaattgaatcaacgacgtgttgctatggttaagtatttgggt
gaattatataattatcgtttaattgaatcgggtgatatttttaaagtattgtattctttg
attacgtttggagtatctttagattataatgttacatcaccattagatccacctgaacat
ctatttcgagttcgtttaacatgcgtactcttagatacctgcgggcagtattttaatggg
ggcagcagtaaaaaaaaattagactactttctaatatttttccaaaattattatgtattt
aaaaaatgtgatccaatttggacaactgaaaatccatttcccgttgatgttgattatatg
tttcgagattgtttgcgttcgttaagaccaaaaatttacttttataatgattataaagaa
gcacaggaagctgttgaagcgttacgaaagaattttgctcaatttttaaatattgaagtg
aatgaagaacatacagagaataatccaaatctaggaacaattcaagaacaagaggaagta
gatattgtatctgatgcacaagatcatacaaccactgaagatgaatctggatatcctgaa
tctgatattgattcagataaaatggaagaaaatgaaatatctgatttagaggctgctaat
gatattgtacctgttgcaccggctactgttaaatgccctgaggatgatgaatttttggct
gcattagataaaatggttgttgataatatgcaagatcgattacgtgattctgtgaagcca
acccaagttgatatatctgtaccaatgcatattaaatcgtctggcttgaagaaaacatat
caaatattaaaagaagaagagttagccttatctagtcctaaagaaaatactactaaacag
tttgtattgatgttacgtaagggtcataaacaacaatataaaagttttgaggcaccaatg
gatagtgaattagcattaaatttacgaaatcaagaggaagctttacgagaggaaaaagag
cgtgttaaaaggcttacgttgaatataactgaacgattagaggaagaagactatcaagaa
atgttggcaactcaacaaagaccacaaactacaagtttgaatagagaacgacggaaatat
caacatccgaaaggtgcaccagatgcggatcttatatttggtccaaaaaaagttcgataa
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