Chrysoperla carnea: 123293528
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Entry
123293528 CDS
T09255
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03030
DNA replication
ccrn03410
Base excision repair
ccrn03420
Nucleotide excision repair
ccrn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123293528
03410 Base excision repair
123293528
03420 Nucleotide excision repair
123293528
03430 Mismatch repair
123293528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccrn03032
]
123293528
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123293528
DNA replication proteins [BR:
ccrn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123293528
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123293528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
RuvB_N
AAA_30
AAA_17
AAA_18
AAA_33
RCF1-5-like_lid
AAA_5
RNA_helicase
AAA_assoc_2
AAA_16
AAA_14
BRCT_2
Motif
Other DBs
NCBI-GeneID:
123293528
NCBI-ProteinID:
XP_044730322
LinkDB
All DBs
Position
1:complement(111626726..111633429)
Genome browser
AA seq
1075 aa
AA seq
DB search
MSKDIRSFFNAVNKKTSQPISASNTKKRPAVICDSSDEEVPATPVEKSKTTKKRKIANGT
EIDKSPKVKNGGSAKKDKKSSPTKLKPISALEMFKSSPKNSKKEKKPEKQETVEDMFMKE
EDVFSDEDFKATLLQVDEVVGKKEKNNEKSSNSKNNNHSSENEKIKSSKVKLENDSEDDK
IKSPKVKSKNDSQDSKIKSPKKDSEDDKIKSPKPKIKTEKESKKLNGSKLDSLGASSDDQ
KYSSNNDDSLCDTSQDIIEKTPKARKRKADLDETITDEDRFERRRQSSVMYQKYLKRAGP
SNPGSKEVPQGTPDCLKPLVFLLTGVYESLERDEAASIITDLGGRVVKAISGKVTHLVVG
EDAGPAKLDKAKSMGIKIISEDGLLDLIRERSSDSKKSGSDSKETKDIKSKKIKTSEEKS
KDTKSEESNKKTPKKHKEAENKKSEVSASPPKKKMIELPKEKSTKTSPTKSKESEEVSEF
FKKDKPKIKLENVDKSESRETEKHVPKSESIISDNVSWVDKYKPKTLKQIIGQQGENSNV
KKLIKWMENWYKNRNPKLKLTKPSPWAKNDDGAYFKAALLSGPPGVGKTTTASLVSTELG
FDVVEMNASCTRSKSLLREDVSNLLSNQSLAGYFNGSEKGMTRKHVLLMDEVDGMAGNED
RGGMQELIQLIKNSSIPIICMCNDRNHPKIRSLVNYCFDLKFSKPRVEQIRGAMMSVCYK
ENIKIKPEVLDQIISGTQNDIRQTLNNLSMWVDDNISLETAKDKANNSKKDIKLGPWDVV
RKVFSEEEQKKTNIHQRSSLFFHDYSMAPLFVQENYLNVVPHCDKKEWLDRFTETAEYLS
LGDLADSRIRKNGAWSLLPLQAMYSSVAPGHLLSGHFGGQINFPSWLGKTSKRNKFLRML
SELQIHMRLSTSGSLQAVNLDYLPYIKNSLIKPLQAGNVDEAIQIMQNYHLLREDLENIV
ELSLWPKQKDPLALINGKVKAAFTRQYNKECQLVSSVVTKKRANIPLDQENEYDEENEDQ
INSENENEDDDDITKDSTIKAKKVLKPEKGETSSKKKKTAETTEKPKKSRDIQVY
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggatattcgatcattttttaatgcagttaataaaaaaacatcacaaccaatt
tcagcatctaatacaaagaaacggccggcagttatttgtgattccagtgatgaagaagtt
cctgcaacgccagttgaaaaatctaaaacaacaaaaaaaagaaaaattgctaatggaact
gaaattgataagtctccgaaggttaaaaatggagggtcagcaaaaaaggataagaaatct
tcaccaactaaattaaagccaattagtgcactagagatgtttaaatcctcacctaaaaat
tcaaagaaagagaaaaaacccgaaaagcaagaaacagtagaagatatgtttatgaaagaa
gaagatgtattttctgatgaagatttcaaagcaactttattacaagtagatgaagtagtt
ggaaaaaaagaaaaaaataatgagaaatcttcaaattcaaagaataataaccatagctct
gaaaatgagaaaattaaatcatcgaaagttaaattggaaaatgattctgaagatgataaa
atcaaatcacctaaagtgaaatccaaaaatgactctcaagatagtaaaataaagtcaccc
aagaaggattctgaagatgataaaataaaatcgccaaaaccgaagattaaaactgaaaag
gagtctaaaaaattgaatgggagtaaactggatagtctaggagcgtcatcagatgatcaa
aaatattcgtctaataatgacgattcactttgtgatacaagccaagatataattgaaaaa
accccaaaagcacgaaaacgtaaagcggatttagatgaaactattactgacgaagatcgt
tttgaaagacgacgtcaatcatctgttatgtatcaaaaatatttaaaacgagctggtcca
tcaaatcctggttcgaaagaagtgcctcaaggtacaccagattgcttaaaacctttggtt
ttccttctcactggtgtatatgagtcattagaacgagatgaagctgcaagtattatcact
gatttaggcggacgagttgtcaaagcaatatcaggtaaagtaactcatctagtggttgga
gaagatgcaggtcccgctaaattggataaagctaaaagtatgggtataaaaataatctcc
gaggatggcttattagatctcattcgagagagatcatccgattcaaagaaatcaggttca
gattctaaagaaacaaaggacatcaaatcaaaaaaaattaaaacttctgaggaaaaatct
aaagacactaagtcggaagaatcaaacaaaaaaacaccaaaaaaacacaaagaagcagaa
aataaaaaatcagaagtgtccgccagcccacctaagaagaaaatgattgaacttccaaaa
gaaaaatcaacaaaaacatcgcctacgaaatcaaaagaaagtgaagaagttagcgaattc
tttaagaaggataagccgaaaataaaactagagaatgtagacaaatccgaatctcgagaa
actgaaaagcatgtacctaaatcagaatcaataatatcggataatgtttcatgggtcgat
aaatataaaccaaaaacacttaaacaaattattggacaacaaggagaaaatagcaatgta
aagaaattaattaaatggatggaaaattggtacaaaaatcgtaatccaaaattaaaatta
acaaaaccaagtccatgggcgaaaaatgatgatggagcgtactttaaagcggcattatta
agtggacctccaggtgttggtaaaactacaactgcgagtttagtatctaccgagttaggc
ttcgatgttgttgaaatgaatgcttcatgcacaagaagtaaaagtttattgcgggaagat
gtcagtaatttattaagtaatcaatctttggcgggatattttaatggtagtgaaaaaggc
atgactagaaagcatgtattattaatggatgaagtggacggtatggcgggaaacgaagat
agaggtggtatgcaagaattaatacaattaataaaaaattcatcaatccctataatatgc
atgtgcaacgaccgaaatcatccaaaaattcgatcacttgttaattattgtttcgatttg
aaattctcaaaaccacgggttgaacaaattcggggagctatgatgtcggtatgttacaaa
gaaaatatcaagataaaaccagaagtattagatcaaattattagtggaacacaaaatgat
attcgacaaacgttaaataatttatcaatgtgggtagacgataatatcagtttagaaaca
gctaaagataaggcgaataattcaaagaaagatatcaaattgggcccttgggatgttgta
cgaaaagtattttctgaagaagaacagaagaaaaccaacatacatcaaagaagtagttta
ttttttcacgattacagcatggcacctttatttgttcaagaaaattatttaaacgttgtt
ccacactgtgataaaaaagaatggttagatcgttttacggaaactgccgaatatttaagt
ttaggcgatttagccgattcacgtatacgtaaaaatggagcttggagtcttttaccatta
caagcgatgtatagtagtgttgctccaggacatttattatctggacattttggtggtcaa
ataaatttcccttcttggttaggtaaaacttcaaaacggaataaatttttacgaatgttg
agtgaattacaaattcatatgcgcttgagcacatcaggaagtttacaagctgttaattta
gattacttaccgtacattaaaaattctctaattaaaccattgcaagccggtaacgtggat
gaagctattcaaattatgcaaaattatcatttattgcgggaagatttggaaaatattgtg
gaattatcattatggccaaagcaaaaagatccattagcacttattaatggcaaagtaaaa
gcagcgtttacaagacaatacaacaaagaatgtcaattagtatcttcagtagtaactaaa
aaacgagcgaatatcccattggatcaagaaaatgagtatgatgaggaaaatgaggatcaa
attaattccgaaaatgaaaatgaggatgatgacgacattacaaaagatagtacaattaag
gccaagaaagtacttaaaccagaaaagggcgaaacttcatcaaaaaagaaaaaaacagct
gaaacaacagaaaaaccaaaaaagtctcgagatatacaggtatattga
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