Chrysoperla carnea: 123294000
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Entry
123294000 CDS
T09255
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03008
Ribosome biogenesis in eukaryotes
ccrn03013
Nucleocytoplasmic transport
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123294000
03015 mRNA surveillance pathway
123294000
03008 Ribosome biogenesis in eukaryotes
123294000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123294000
03009 Ribosome biogenesis [BR:
ccrn03009
]
123294000
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123294000
mRNA cycle factors
Stress granule specific factors
123294000
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123294000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
LRR_4
UBA_8
UBA_4
NTF2
LRR_9
Tap-RNA_bind
Motif
Other DBs
NCBI-GeneID:
123294000
NCBI-ProteinID:
XP_044730983
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Position
2:complement(7352466..7371314)
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AA seq
523 aa
AA seq
DB search
MEGNLPLVLNQSNALIVKKMGAFKSCILNQPLLWHKFVIHDGASLDRDKVLKVIVDKADD
LFPIQYQIEDKNSSFIARNCCTAIDVLCSRNLVLEYPGGSPMIMSILLNKGMPTETTLKI
QDVLMHVLNRRFTKKTGVLNLENLVKDPGLSDKVYCALSNHKILSFVLSLARGLGVKCLR
LNNNEIKSIDGLEAAWAHRTITSIDLRNNLIENMVKLFPLKSMNIQELWLDGNPVCQNYA
ENGYVLAIKEICPNIERLDGQVLATNGVPAFRRNYLVKYEALDFVDQFLEHYFTLYDSNN
RKSLEGLYYRGALFSLTCSLIMGQVTTPTARLDEYKRITRNLLKMSDYSKHDKYLFHTSE
EIVKALCMLPPTEHDPYTFTVDLLYYSNVTAVLLVTGVFREQVEKLSDPDSLYGFTRTFV
LTAAAHGEYNIINEQVHIFNATTVQVQRALKVVKVPSIIQNPKLYTNEDKNCIIETFARI
STLNMANAKKMLESAAWDLKTALTKFVDQYKDGRLPPEAFKVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaatttaccactggtattaaatcaatcaaatgctctcattgtgaaaaaaatg
ggagcatttaaaagttgtatattaaatcaaccactattatggcataaatttgttattcac
gatggagctagtttagatcgagataaagttttaaaagttattgttgataaggctgatgat
ttatttccaatacaatatcaaattgaagataaaaattcttcgtttattgctcgtaattgt
tgtacagcaattgatgtattatgtagtcggaatttagtattagaatatcctggtggatct
cctatgattatgagtattttattaaataaaggaatgccgacagagacaacgttaaagatt
caagatgttttaatgcatgtattaaatagaagattcacaaagaaaacgggagttttaaat
ctggaaaatttagttaaagatccaggtttatcagataaagtatattgtgctttatccaat
cacaaaattttatcatttgtcctatcactggcaagaggcttaggtgtaaaatgtttacga
ttaaataataatgaaattaagagtattgacggtttggaagctgcatgggcccatcgaaca
attacatccattgatttacgtaataatctgattgaaaatatggtgaaattatttcctttg
aaaagtatgaacatccaagaattatggttagatggaaatccagtatgtcagaattacgca
gagaatggatacgttttggcaataaaagaaatttgtcccaatattgaaaggctggatggt
caagtattagcaacgaatggtgtaccagcgtttcgacgaaattatttagtgaagtatgaa
gcattggatttcgttgatcaatttctagaacattatttcactttatacgattcaaataat
cgtaaatcgttagagggtttgtattatcgtggtgctttattttctttgacatgttcttta
atcatgggacaagttacaacaccgacagcgagacttgacgaatataaaagaattactcga
aacttattaaaaatgtccgattattcaaaacacgacaaatatttatttcatacgtcggaa
gaaattgttaaagcattatgtatgttaccaccaactgaacatgatccatacacgtttaca
gtggatctattatattattcgaatgtaacagctgtactcctagtaactggagtatttcgt
gaacaagttgaaaaattatcagatccagattcgttgtatggttttacacgaacgtttgtt
ttaacagcggccgctcatggtgaatataacattataaacgaacaagtacacatctttaat
gccaccactgttcaagtgcagcgtgctttaaaagttgttaaagtaccgagcatcattcag
aacccaaaattatatactaatgaagataaaaattgtattattgaaacatttgcaagaatt
agtacgcttaatatggcaaatgccaaaaagatgttggaaagtgcggcatgggatttaaaa
acagcattaaccaaatttgtagatcaatacaaagatggacgattaccaccagaagctttt
aaagttacatga
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