Chrysoperla carnea: 123294010
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Entry
123294010 CDS
T09255
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123294010
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123294010
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
Smg8_Smg9
MMR_HSR1
NB-ARC
KAP_NTPase
nSTAND3
Septin
ABC_tran
Dynamin_N
Roc
RNA_helicase
AAA_14
AAA_29
Motif
Other DBs
NCBI-GeneID:
123294010
NCBI-ProteinID:
XP_044731000
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All DBs
Position
2:46331771..46335116
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AA seq
494 aa
AA seq
DB search
MSDYDKSKDVRRRRYYSSQRDRDNPSYLNLPRRGLYNKYERENSREFDRNTNDAKEKSMP
QPTILLKNRESNQTRAVSPKRVTPSIKEPESSTPQPKQIQKSKSSSVDLSQSLWCPPYMK
HSVPLIDENFMFVEDVQEYLQDNSSDFLVVGIIGNQGVGKSTIMNMLIDDNIHKISDYKE
RERSGSTSDGSKTNDIELNLKNISENFSNLNVQHKGSTELLNCGSDEAFFKVQSIHELER
GIHCTVGLNAYITPNRTILLDSQPILSVSNLDEMIQTGSAATAAGEIISTENSSEIQSLQ
LAAFLLTVCHVVIVVQDWFFDPNVIRFIQTGEMLKPSLTTAGEEELNEHSPHLLLLHNKA
RVEDFNPPQFKIIQQTYRSLFNKSKLKLDTGLGIGTGNILHSLCSKTCGEPLNIFLLPNT
EEEEDEEEQDPIVYRGYPKLDQLIYKLKSKIQGATRNQLTHAQLSEKAWLHYASKAWEGV
KKSSFFVEYNKLLP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatgataaaagcaaggatgttcgacgaagacgatattattcgtcccaaagg
gatcgtgataatcccagttacttgaatcttcctcgtcgaggattgtataacaaatatgaa
cgcgaaaattccagagaatttgataggaatactaacgatgccaaagagaaatcaatgccc
caacctacaatccttttaaaaaatcgagaaagtaatcaaacacgggctgtgtcaccaaaa
agagtcacacctagtataaaagaacctgaatcatcgacgccacaaccgaaacaaattcaa
aaatctaagtcttcatcagtagatttgtcgcaatcattatggtgtcctccgtacatgaag
cacagtgttccattgatagatgaaaatttcatgtttgtggaagacgttcaagaatatcta
caggataattcatcagactttctagtggttggaataattggtaatcaaggtgtaggaaaa
tcaacaattatgaatatgttaatagatgataacattcataaaataagtgattacaaagaa
cgagagcgtagtggcagtacttcggacggctcaaagaccaatgacattgaattaaattta
aaaaatatatctgagaatttttcaaatttaaatgttcagcataaaggtagtactgaatta
ttaaattgtggaagtgatgaagctttttttaaagtacaatcgatacacgaacttgaacgc
ggtattcattgcacagtcggtttaaatgcttatattacaccaaatcgaacaattctcctg
gattctcaaccaattttatcagtatcaaatttagatgaaatgatacaaacaggttcagcg
gctaccgcagctggtgaaataatttccacagaaaattctagtgaaattcaatcattgcaa
ttagcagcattccttttaaccgtatgccatgtggtaattgtggttcaagattggtttttt
gatcctaatgttataagatttatacaaactggtgaaatgttaaaaccgagtttaactact
gctggtgaagaagaattaaatgaacattccccgcatttattgttgcttcataataaagct
cgagttgaggattttaatcctccacagtttaaaatcattcagcagacataccggtcgcta
tttaacaaatccaaattgaaattagatactggattagggattggaactggaaatatactc
catagtctttgttctaaaacttgcggagaacctttaaatattttcttattgccaaataca
gaagaagaagaagatgaagaagaacaagatccaattgtatatcgtggttacccgaaatta
gatcaattgatttataaattaaaatcgaaaatacaaggtgcaacacgtaatcaattaacg
catgctcagttatcggaaaaagcgtggcttcattatgcttcgaaagcgtgggaaggtgtt
aagaaaagttctttttttgtcgaatataataaattattaccataa
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integrated database retrieval system