KEGG   Chrysoperla carnea: 123294063
Entry
123294063         CDS       T09255                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ccrn  Chrysoperla carnea
Pathway
ccrn03030  DNA replication
ccrn03410  Base excision repair
ccrn03420  Nucleotide excision repair
ccrn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccrn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123294063
   03410 Base excision repair
    123294063
   03420 Nucleotide excision repair
    123294063
   03430 Mismatch repair
    123294063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccrn03032]
    123294063
   03036 Chromosome and associated proteins [BR:ccrn03036]
    123294063
   03400 DNA repair and recombination proteins [BR:ccrn03400]
    123294063
DNA replication proteins [BR:ccrn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123294063
  DNA Replication Termination Factors
   ELG1-RFC complex
    123294063
Chromosome and associated proteins [BR:ccrn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123294063
DNA repair and recombination proteins [BR:ccrn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123294063
  Check point factors
   HRAD17(Rad24)-RFC complex
    123294063
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_11 RuvB_N AAA_14 AAA_assoc_2 ResIII AAA_5 AAA_16 DUF815 AAA_30 DEAD AAA_7 AAA_24 PhoH AAA_19 Thioredoxin_6 BrkDBD TIP49 Mg_chelatase AAA_3 bpMoxR AAA_25 RCF1-5-like_lid
Other DBs
NCBI-GeneID: 123294063
NCBI-ProteinID: XP_044731068
LinkDB
Position
2:complement(3699144..3705715)
AA seq 330 aa
MTLGEVKTNLPWVEKYRPSTLEDLVSHEDIIKTISKFIKDDQFPHLLFYGPPGTGKTSTI
LACARQMYTANSFTSMVLELNASDDRGIGIVRGQILNFASTRTIFKSGFKLIILDEADAM
TNDAQNALRRIIEKYTDNVRFCIICNYLGKIIPAIQSRCTRFRFGPLNNDQIIPRLNHVI
DKESLTVTEDGKQALLTLASGDMRKVLNILQSTWLAYKYVNEENVYTCVGHPMKNDIENI
VKWLLTEDIDVTYKNIKTLKVSKGLALTDILSEVHLYIQRVEFPSEVFVYLLIKLSDIEM
RLATGTNEDIQLSALISAFQIGRDLVEQQS
NT seq 993 nt   +upstreamnt  +downstreamnt
atgacattgggtgaagttaaaacaaatttaccatgggttgaaaaataccggccaagtact
ttggaggatcttgtatctcatgaagatattatcaagactatcagtaaatttatcaaagat
gatcaatttcctcatcttctattttatggaccacctggaaccggtaaaacgagtacaata
ttggcatgtgctcgtcaaatgtacaccgcaaatagtttcacatcgatggtcttggaattg
aatgcgtccgatgatcgtggtattggaattgtacgaggacaaatattgaattttgccagt
acacgaactattttcaaaagtggttttaaattaattattttggatgaagcggatgccatg
acaaatgatgcgcagaatgctttaaggcgaataatcgaaaaatatactgataatgtccga
ttctgtattatctgtaattatttgggtaaaataattcctgcgatacaatctcgatgtacc
cgatttcgatttggaccattgaacaatgatcaaattattccacgattaaatcatgttatt
gataaagaaagtttaaccgtaacagaagatggaaaacaagcattacttaccttagccagt
ggtgatatgaggaaagtattaaatatattacaaagtacttggctggcgtataaatatgtg
aacgaggaaaatgtttatacatgtgtgggacaccctatgaaaaatgacattgaaaatatt
gttaaatggcttctaacagaagatattgatgttacttataaaaatattaaaacattaaaa
gtttcgaaaggcttagccttaacggatattttatctgaagttcacttatatattcaaaga
gttgaatttccatctgaagtgttcgtataccttctaattaaactatcagatattgaaatg
cgtttagcaactggtacaaatgaagacattcaattatccgcgttaatatcagcctttcaa
attggtcgtgatctagtagaacaacaatcgtga

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