Chrysoperla carnea: 123294200
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Entry
123294200 CDS
T09255
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123294200
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123294200
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123294200
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123294200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
SH2
Tex_central_region
Spt6_S1
HHH_9
HHH_3
Tex_YqgF
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
123294200
NCBI-ProteinID:
XP_044731245
LinkDB
All DBs
Position
2:62596046..62605747
Genome browser
AA seq
1753 aa
AA seq
DB search
MADFIDSEADESEEEEGLDPQEKKRAKRAKAVDSSEEEEDDEDKLREELEDLIDDNPIEE
ESDGEDSDGSGGSKKRKKSDDEEFDDRLEDEDYDLIEENLGVKVERRKFKRLRRLEDEES
DGEGAEDDGQDREAIANDLFEGGSDEEREEVVRIHDEERRSERSHRVVEQDNYDQEASED
EYSDADDFIVDDDGRPIADKRKKRKPIFTDAALQEAQDIFGVDFDYDEFDKYDQDDYEEE
EDEEEIDEYVDDDEGDGERRRRPKKAARKKPTKKSIFEIYEPSELKRGHFTDLDNEIRNT
DIPERMQLRDIPVTPVPEGSNELEEEAEWIYKHAFTKPTISTQPGVVPGERARKGPQTVG
KIKQALDFMRNLQLEVPFISFYRKEYVQPELNINDLWKVYKFDAKWCQLRSRKQTLLTLF
ENMRSYQLDKIMENPDAPIPDDMRLIKDDDIERLKNVQSTEELRDVHTHFLLYYAADIPA
MQAATKAKEREKVRAERRAERLKKLAEEGEEGGDIDAVNIPDEEEEEPALEPEGLKQAGR
TGPYAMCRKAGLDGFAKRFGLTPEYFAENLRDNYQRHEVDQEHVDPLELAKNYVNKKFTT
ADEVLQAGKFMVAMQLAREPLVRKCIRETFYERAKISIRPTKKGLKEIDENHCCYSMKYV
KDKPVRDLTGDQFLKLCIAEEDKLLTINISETIEGNTSSNYLEEVKQLYIRDEFSKHVQD
WNAVRIECVERALTRFILPDLVKELKRILLAESKEAVLKLCCRKLYNWIKVAPYNAEFPD
EEDDDWDTSKGLRVMGVSYVPDYSQAAFACIVGPDGDVTDYLRLPHLLKRKNSFREDERK
LKEADLNTLRNFIGNKKPHLVCVGGESREALMVAADIKEVIAGLMEDEQFPALNVEIVSN
DLAKVYSNSIKGTADFREYPELLRQAVSIARKMQDPLVEYSQLCTADEEILCLRYHTLQD
YINREELLEGLYLEFVNRVNEVGVDINLAVQQSHTSNLVQFVCGLGPRKGQALLKVLKQS
NQRLENRTQLVTLCHMGPKVFINCSGFVKIDTNSLGDSTEAYVEVLDGSRVHPETYEWAR
KMAVDALEYDDEDANPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRSE
LNSRYKDMREPYTSPNPEELFDMLTKESPETFYIGKMCMVTVTGISRRKPQGEQLDQANP
VRNDETGLWQCPFCLKNDFPELSEVWNHFDAGSCPGQATGVRLRLDNGISGYIHIKNISD
KHVTNPEERVHIGQIIHARIIKIDVERFSVDCTSKSSDLADKNHEWRPQKDPFYDQEAED
ADLQVEAEAKKQKARQVYIKRVIVHPAFHNISFAEAEKLMVQMDQGEVIVRPSSKGADHL
TITWKVADNIYQHVDIREEGKANAFSLGSSLWIGGEEFEDLDEIIARYVNPMAAHARDLL
YFKYYRDTGGGLRDKMEELLKEEKKKNNSKIHYFISASKNYPGKFLLSYLPRVKCRHEYV
TVTPEGFRFRQQMFDSVTALFKWFKEHFRDPIPGGTPSTPRGGQTNRTPYHSMGTPNVNI
SSMNQEAIHRVAQNLPSHMLQSLSAVANQTPHYPHTPGGGYATSGYINTPYTPSGQTPFM
TPYQTPRYGQQTPAHMPPPMSGPFLHPGAVTPAHRSHVMENSPRSRAYNTSNDPTDWQKA
AEAWARSKTHDDGRNTPRGSTGQRTPRYDDLNRNRKAGSHSTKSPRSGRSTPRTNTSPRS
MSIGDATPLYDEN
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttattgattccgaagctgacgaaagtgaggaggaagaaggattagatcct
caagaaaaaaagagagctaagcgtgccaaagcagtggatagttcggaggaagaggaagat
gatgaagacaagttacgcgaagagctagaggatttaattgacgacaatccaattgaagaa
gaaagtgatggagaggattctgatggctctggtgggtcgaagaagcgaaaaaagagtgat
gatgaagaatttgatgatcgtttagaagatgaagattacgatttaattgaagaaaatttg
ggtgtgaaagttgaaagaaggaaatttaaacgtttaagacgtttggaagatgaagaaagt
gatggtgaaggtgctgaagatgacggccaagatcgtgaagccattgcaaatgatctgttc
gaaggaggttctgatgaggaacgagaggaagtggtacgtattcatgatgaagaaaggcga
tcagaacggagtcatcgtgtggtggaacaagataattacgaccaagaagcttcggaagat
gaatactcggacgcagatgattttattgttgatgatgatggtagacccattgcagataaa
cgtaaaaaaagaaaacctatttttaccgatgcagcattacaagaagctcaagatattttc
ggcgtagattttgattatgacgaatttgacaaatatgaccaagacgattatgaagaagaa
gaagacgaagaagaaattgatgaatatgtagatgatgacgagggtgatggagaacgcaga
cgaagacctaaaaaggcagctcgaaagaagccaacaaaaaaatcaatttttgaaatctat
gaaccaagtgaattgaaacgtggacattttacggatttggataatgaaattcgtaacact
gacatacctgaacgtatgcaattgcgtgatataccagtgacaccggtaccagaaggttcc
aatgaactagaagaagaagctgagtggatttataaacatgctttcactaaaccaacaatt
tcaactcaaccaggtgttgtacccggcgaacgtgctcgtaaaggaccacaaacagttggt
aaaattaaacaagctctagactttatgagaaatttacagttggaagttccatttatttca
ttttatcgtaaggaatatgtacagcctgagttgaatattaatgatttatggaaagtttat
aaatttgatgcaaagtggtgtcaattacgcagtcgcaaacaaactttattaactttattc
gaaaacatgcgttcctatcaactagacaaaattatggaaaatcctgatgctccaattcct
gatgatatgcgtcttataaaagatgacgatattgaacggttaaagaacgtacaaagtaca
gaagagctacgtgacgtccatacacactttttactatattatgcagccgatatcccagca
atgcaggctgcgactaaagcaaaagaacgagaaaaagtacgagccgaacgacgtgctgag
cgtttgaaaaagttagcggaagaaggcgaagaaggcggagatatagatgctgtaaacata
cccgacgaggaagaagaagaaccagcacttgaaccagaaggattgaaacaagctggtcga
actggcccctatgcgatgtgtcgtaaagctggattagatggttttgcaaaacgatttggt
ttaacacctgaatattttgctgaaaacttgcgtgataattatcaaaggcatgaagtcgat
caagagcatgttgatcccttggaattagccaaaaattacgtcaataaaaagtttacaact
gctgatgaagtgttacaagcgggaaaattcatggtggcaatgcaattagcacgcgagcct
cttgttagaaagtgtattcgtgaaacattttacgaaagggcaaaaatttcaattcgacct
acaaagaagggtttgaaggaaattgatgaaaatcattgctgttatagtatgaaatacgta
aaagataaacccgtaagagatttaacgggagatcagtttttaaaattatgcattgctgaa
gaagataaattattgacaatcaatattagcgaaactattgagggaaatacgtcatcaaat
tatctagaagaagtaaagcagttgtatatacgggatgagtttagtaagcatgttcaagat
tggaatgcagtccggatagaatgcgtcgagcgtgctttaacacgatttatattacccgat
ttagtaaaggaattgaaacgtatattgttagctgaatcaaaagaagccgttttgaaatta
tgctgcagaaaattgtataattggattaaagtagctccgtataatgcagaattccctgat
gaagaagacgatgattgggacactagtaaaggactacgtgtaatgggtgtatcatacgta
ccagactattctcaagccgcatttgcgtgtattgtgggaccagatggtgatgttactgat
tatttacgattaccgcatttattaaaacgtaaaaattcatttcgtgaagatgaacgtaaa
ttaaaagaagctgatttgaatactttacgaaattttattggtaataaaaaaccacatcta
gtgtgtgttggtggagaatcgcgcgaagctttaatggtggccgcagatattaaagaagtt
atagctggtttaatggaagatgaacaatttcccgctttaaatgttgaaattgttagtaat
gatctagctaaagtttattcaaattccattaaaggtacagccgattttcgtgaatatcct
gagttgttacgtcaagcagtttctattgcacgtaaaatgcaagatccacttgtagaatat
tcacagctatgtacagccgatgaagaaatcttatgtttacgttatcatacgttacaagat
tatataaatcgtgaagaattgttagaaggtctttacttagaatttgtaaatcgtgtaaat
gaagtaggtgtagatattaatttagcggtacaacaatcacatacttccaatttagttcaa
ttcgtttgtggtttagggccaaggaaaggtcaagctttattgaaagttttaaaacaaagc
aatcaacgattagaaaatcgtacacagttagttaccctgtgtcatatgggtcctaaagtg
tttataaattgttctggttttgtgaaaattgacactaactcattgggtgatagtactgaa
gcttatgtagaagtgctggatggatctcgtgtacatccagaaacttacgaatgggcacgt
aagatggctgttgatgcactagaatatgatgatgaagatgcaaatcctgcgggtgcgtta
gaagaaattcttgaagctccagagcgtctaaaagatttagatttagatgcttttgcagaa
gaattagaacgacaaggttttggaaacaaaagtataacgttgtatgatattcgatccgaa
ttgaattctaggtataaagatatgagagaaccatatacatctccaaatccggaagaattg
tttgatatgttaacaaaagaaagtcctgaaacattctatattggtaaaatgtgcatggtt
acagtcaccggtattagtcgtcgaaaaccacaaggtgaacagctagatcaagcaaatcct
gtgcgtaacgatgaaacaggattatggcagtgtccattttgtttgaaaaatgacttccct
gaattatcggaagtgtggaatcatttcgatgctggttcatgtcctgggcaagcgactgga
gttcgtttacggttggataatggtatatctggttatatacacattaaaaatatatctgat
aagcatgtgacgaatccagaagagcgtgttcatattggacaaattattcatgcgcgtata
attaaaatcgacgtagaacgtttttcagttgactgtacgtctaaatcttctgatttagct
gataaaaatcatgaatggcggccacaaaaagatccattttatgatcaagaagcggaagat
gctgatttgcaagttgaagctgaagcgaaaaaacaaaaagcacggcaagtttatatcaaa
cgagttattgtgcatcccgcttttcataacatatcgtttgccgaagctgaaaaactcatg
gtccaaatggatcaaggggaagtaattgtgcggccttcgagtaaaggcgcagatcattta
acaattacgtggaaagttgctgataatatttatcagcatgttgatatacgtgaagaaggt
aaggcaaatgcattttcgctggggtcatcgttatggatcggcggagaagagtttgaagat
ttagacgaaataatcgcacgttatgtcaacccaatggcagcacatgctcgcgatttatta
tattttaaatattatcgtgatactggtggtggtttaagggataaaatggaagaattatta
aaagaagaaaagaagaaaaataattcgaaaatacactattttatttcggcttcaaaaaat
tatcctggtaaatttttactatcgtatttacctcgcgtaaaatgtcgacatgaatatgtg
acagtgacaccagagggctttcgatttagacaacaaatgtttgattcagttacggcatta
tttaagtggtttaaagaacattttcgagatcctattccaggtggaacaccgagtacaccg
cgtggagggcaaacaaatcgtacaccgtatcatagtatgggcacaccaaatgtgaatatt
tccagtatgaatcaagaagctattcatcgtgtagcacaaaatcttcctagccatatgtta
caatcattatccgcagtggcgaatcagactccacattatccacatactccaggcggtggt
tatgcaactagcggctatattaatactccatatacaccgtccggccaaacaccatttatg
acaccatatcaaacaccaagatatgggcaacaaacacctgcacatatgccaccgcctatg
tcaggaccgttcctacatccaggtgctgtaacacctgcacataggtcacatgtaatggaa
aattcaccacggtctagagcgtataatacatcaaatgatcctacagattggcaaaaggct
gctgaagcatgggctagaagtaaaacacatgatgatggaagaaatacacccagaggaagt
actgggcaacgaacacctagatatgatgacttaaatagaaatcgaaaagctggaagtcat
tctactaaaagtcctcgatcaggtcgatcaactccacgaacaaacacgtcacctagatcc
atgtcgattggtgatgctactccattatatgatgagaattag
DBGET
integrated database retrieval system
