Chrysoperla carnea: 123294453
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Entry
123294453 CDS
T09255
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123294453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123294453
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123294453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123294453
NCBI-ProteinID:
XP_044731418
LinkDB
All DBs
Position
3:10991400..10996807
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AA seq
650 aa
AA seq
DB search
MSRHRNIRSMNYSEECDGYDDVYGHSVEDDYCISPSDAAQFMYNREGRNRSMGAFFNTEG
TIAEGDENETPRPKENAEGDIDKAKLESCVESIKKVVGDSVSHKTLVDTIINYNFNTEKA
LDSLLTHMTDKNLSTKTSKDIVTVEVPVRSVKIVPQTLNVTKGFELPRPDKDVSRPNALT
PRSQSPASGTATPLEGRATPDIQKTKDSKIDPLALYQKEREGEKSHLYMIIIGHVDAGKS
TLMGHLLYDLGQINQRTMHKYETESRKLGKQSFLYAWVLDETGEERERGITMDIGRSQFE
TKTKKITLLDAPGHKDFIPNMISGAGQADVALLVVDATKGEFETGFDLGGQTREHALLVR
SLGVGQLAVAINKFDNVDWDKKRFDEIKNSLGSFLRQAGFRDKDVTYVPVSGLTGQNLVG
PPTENALLQWYNGPCLLDVIDKFSVPERAVSKPFRFSIHDIYKGTGAGLCVSGRIETGVL
NVGDRVLLCPVKEGATVRNITLDEVPMQTAFAGDQVSITLTGIDIQNITIGCILSTPISP
VPVVQKFEARIVVFNVKTPLTRGYPVLLHHQSLIEAANITKIKAQLHKSTGEVIKKKPRC
LGSYSNAIVEIVVNKPICIELFRDVKELGRFMLRVAGTTVAAGLVTELLE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacatcgtaatatacgttcaatgaactattctgaagaatgtgatggatatgat
gatgtttatggacattcggttgaagatgattattgtatttcaccaagtgatgcagctcaa
tttatgtataacagagaaggcagaaatcgtagtatgggcgcattttttaatacagaaggg
actatagctgaaggtgatgaaaatgaaacaccacgaccaaaagagaatgctgagggtgat
attgataaagctaaattggaatcatgtgtggaaagtattaaaaaagtggttggtgattct
gtatcccataaaactctggttgacacgataattaattataattttaatacggaaaaagct
ttggacagtcttctaacacatatgactgataagaatctttcaacgaaaacatctaaagat
attgtcacagtagaagtaccagtcagaagtgtgaagattgtaccgcaaacattaaatgta
acaaaaggatttgaacttcctcgacctgataaagatgtttcccggccaaatgcattaaca
ccaagatctcaatcgccagcatctggtaccgcaacacctttagaaggtcgtgcaacacca
gatattcaaaaaacaaaggactccaaaatcgatcccttagctttgtatcaaaaagaaagg
gaaggtgaaaaaagtcatttatatatgattataattggacatgtcgatgctggaaaatca
acgcttatgggtcatttattatacgatcttggacaaatcaatcaacgcacaatgcataag
tatgaaacagaaagtcgtaagttgggaaaacaaagttttttatacgcttgggtattggat
gaaactggtgaagaacgtgaacgaggaattacgatggatattggacgatcgcaattcgaa
acgaaaacaaagaaaataacgttattagatgctcctgggcataaagattttattcctaac
atgatatccggtgctggtcaagcggatgttgcattgttagttgtcgatgcaacaaaggga
gaatttgagactggttttgatttaggtggacaaacaagagaacatgctctattagttcga
tctttgggagttggtcaattagctgtggctattaataaatttgataatgttgattgggac
aaaaagagatttgatgaaattaaaaatagtttaggatcatttttacgtcaagctggattt
cgagataaagatgttacctatgtgccagttagtggtttaactggacaaaatttagttgga
cctccaaccgaaaatgctcttttacaatggtacaatggaccttgtttacttgatgtcata
gacaaattcagtgtacctgaacgagcagtttcgaagccatttcgattttctatccacgat
atttataagggaactggtgctggattatgcgtttccggacgaattgagactggcgtatta
aatgttggtgatcgagtattgttatgccctgtaaaagaaggtgctactgtacgtaatatt
actcttgatgaagttcccatgcagacagcgtttgctggtgatcaagtgtccatcacttta
actggaatcgacatacaaaacattacaattggatgtattctttcaacgccaatttcacca
gtacctgtcgttcagaaattcgaagctcgtattgttgttttcaatgttaaaactccactg
acacgaggatatccggtgctcctacatcatcaatctttaattgaagctgccaatattaca
aaaatcaaagcacaattacacaaaagtacgggtgaagttattaagaaaaaaccacgttgt
ttgggaagctattcgaatgccattgttgagatcgttgtaaataaacccatttgtattgaa
ttgtttcgtgatgtgaaagaattgggacggtttatgctacgtgttgctggtactacagta
gcagctggacttgttactgaactacttgaataa
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