Chrysoperla carnea: 123294916
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Entry
123294916 CDS
T09255
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03440
Homologous recombination
ccrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123294916
03460 Fanconi anemia pathway
123294916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccrn03032
]
123294916
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123294916
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
123294916
DNA replication proteins [BR:
ccrn03032
]
Eukaryotic type
DNA Topoisomerases
123294916
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
123294916
FA (Fanconi anemia) pathway
123294916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
HVO_2753_ZBP
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
123294916
NCBI-ProteinID:
XP_044732045
LinkDB
All DBs
Position
3:complement(3165810..3222136)
Genome browser
AA seq
1091 aa
AA seq
DB search
MGSLKYLRLFYSQTFHHYCTSNHIIKMKILNVAEKNDAAKNIAGYLSRGTARRREGLSVY
NKIYEFQCQVMNQNATMVMTSVSGHLQSYEFSSFYKRWEGCSPLELFQAPVMKICPKDYE
NIKKTIEREIRSCNWLIIWTDCDREGENIGYEIIDVCTSVKPGIQVYRARFSEITAPSVM
RALNTLERPNKNISNAVDVRQELDLRIGAAFTRLQTLRLQQVFPQKLAENLVSYGSCQFP
TLGFVVDRYKAIEDFVEQQFWKIKMSHTLEELTVDFLWNRDRLFDKDLVQAILDLCLENP
TATVKKVISKPKNKWRPTPLDTIEMEKSASRKLKLSAKTTMQIAEKLYSKGLISYPRTET
NIFPKELNLTNLVEQHLGDNTWGFFANRIMEWGGPTPRQGKKSDQAHPPIHPTKHADNLQ
GDEKRVYEFIVRHFLACCSRDAIGLETVVDVDICDEGFQAKGLMIIERNYLDVYPYEKWN
AKEIHIYQEAQQFQPTVLEMSEGHTTAPPLLTEADLIALMEKHGIGTDATHAEHITTIQD
RQYVALPDGVHFVPGKLGMGLVEGYDRMGLEVSLAKPNLRAELEHDLKLICDGVKNPEAV
LREQISKYEAVFRKVLLQIGVIDRAIGDRLEAEPRQNVQMNIMTESTTSPFKCPKCGNPM
KFRTKKNSTEIFLGCTGWPNCNNVVWFPMEVKNASVMDESCQRCGPEYKKIKLEFIRHVY
GCYTSPHIACLGGCDRNLLDDFNISADRVSQSTGTRQARTPNTVPSQFTNISQARIITST
QINNDNNRNNAVNNGTRTLGSTNNRNDNTRIQSTNNRTDNNRTTQSTFPIRDSGYTTNSN
PTRNTFGNNSQSNSPNNFGHVNIPSLNASSNRNNQRTNAEDSEIVCGCSQPAILLTVRKQ
GPNIGRQFYKCASGACEFFLWFSSNENNSEPSSSTSNNLPNFMNHTNDGAGANITCNCGE
PAVKRTVQKDTPNKGRSFYSCPKPPNDRKCNFFKWADESGNVGDANDEGFGGDGGGGGGW
GGWDGGGGGGGGGRGRGRGRGRGGNAGGRGDYSDNQSQSNNRKRKRNESTGKRRCGNCGE
EGHTKPKCPHK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgggatcattaaaatatttacgattattttattcacaaacattccatcattattgtact
tcaaatcatataattaagatgaaaatattaaatgtagctgagaaaaatgatgctgctaaa
aatatagctggttatttatcacggggaacagctagaagacgagaaggactttctgtgtac
aacaaaatatatgaatttcaatgtcaagtgatgaatcaaaatgctacgatggtgatgaca
tcggtatcaggacatttacaaagctatgaattttcaagcttttataaacggtgggaaggt
tgtagtccgttagagttgtttcaagcacccgttatgaaaatatgtcccaaggattatgaa
aatataaaaaaaaccatagagcgtgaaattcgatcttgtaattggttgatcatatggacc
gattgtgatcgtgaaggtgaaaatatcgggtatgaaattattgatgtatgtacctcggtt
aaacctggtattcaagtataccgtgctcgtttttctgaaataacagccccatcggttatg
cgtgccttaaatacattggaacgacccaataaaaatattagcaatgcagttgatgttcgt
caagaattggatcttcgaataggtgctgcttttactcgattgcaaacattacgattacag
caagtatttccacaaaaattagctgaaaatttggttagctatggcagttgtcagttccca
acattaggatttgttgttgatcgatataaagcaattgaagatttcgttgaacagcaattc
tggaagattaaaatgtctcatacgctagaagaattaacagtggattttttatggaatcgt
gatcgtctatttgataaggacttagtacaagcaatattggatttatgcttagaaaatcct
acagcgactgtaaagaaggttattagtaaacctaaaaataagtggcgaccaaccccatta
gatacaatcgaaatggaaaagagtgcttcaagaaaactaaaattatcagcgaaaacaacc
atgcaaattgctgaaaaactttattcaaaaggcttaatcagttatccaagaacagagaca
aatattttccctaaagaattgaatttaacaaatttagttgagcaacatttgggtgacaac
acatggggtttttttgcgaatcgtataatggaatggggtggaccaacaccacgacaaggt
aaaaaatcagatcaagctcatcctcccatacatccaacaaaacatgctgataatttacaa
ggtgatgagaaacgtgtatatgaatttattgtacgccattttcttgcatgttgttcaaga
gatgccataggtttggagacagttgttgacgttgatatttgtgatgagggatttcaagct
aaaggtttaatgattattgaacgcaattatttagatgtttatccatatgaaaaatggaat
gccaaggaaatacatatttatcaagaggctcaacaatttcaaccaaccgttttggaaatg
tcggaaggtcacactacagcaccacctttgttaacggaagctgatttaattgcattgatg
gaaaagcatggtattggtacggatgcaacgcacgctgaacatataacaacaatacaagat
cgtcaatatgtggcattaccagatggtgttcattttgtaccaggcaagttgggtatggga
ttggttgaaggctatgatcgtatgggtttagaagtgtctttagctaaaccgaatctacga
gctgaattggaacatgatttaaaattaatttgcgatggtgtcaagaatccagaggcagta
ttgcgtgaacaaataagcaagtatgaagcagttttccgtaaggtattattacaaattggt
gtgattgatagagcgattggagaccgactagaagcagaacctcgacaaaatgtacaaatg
aacataatgaccgaatcaacaacgtcaccatttaaatgtccaaagtgtggtaatccaatg
aagtttcgtaccaaaaagaatagtacggagatatttttaggttgcactggatggccaaat
tgtaataatgtggtttggtttccaatggaagtgaaaaatgcatctgtaatggatgaatcg
tgtcaaaggtgtggacctgaatataaaaaaataaagcttgaattcattagacatgtttat
ggttgttacaccagtccacatattgcatgtcttggcggttgcgatcgtaatttgttagat
gattttaatattagtgctgatcgagttagtcaaagtacaggtactcgccaggctcgtact
ccaaataccgttccaagtcaatttacaaatatatcacaagcccggattattacatcaaca
caaataaataacgataataatcgtaacaatgcagtcaataatggtacaagaactttggga
tcaactaataacagaaatgacaatactcgaatacagtctacaaacaatagaaccgataat
aatcgaacaacacaatctacgtttccaattcgcgacagtggttatacaaccaatagtaat
ccaacacgaaatacatttggaaataattcgcagagtaatagtccaaacaattttggtcat
gttaatattccatcactaaacgcctcatcaaatcgaaataatcagagaacgaatgccgaa
gattcagaaattgtatgtggatgttcacagccagcaattttactcacagttaggaaacaa
ggacctaatattggaagacaattttacaagtgtgcaagtggtgcttgtgagttttttctg
tggttctcatccaatgaaaataatagtgaaccttcttcatctacctcaaacaatttacca
aattttatgaatcatactaatgatggtgctggtgccaatattacttgtaattgtggagaa
cctgctgtcaagcgaaccgttcaaaaagacacacctaataaagggagatcgttctattca
tgccctaaaccaccaaatgataggaagtgtaatttctttaaatgggcagatgaatcagga
aacgttggtgatgcaaacgatgaaggttttggtggtgatggtggcggcggaggaggatgg
ggtggatgggacggaggaggaggaggtggcggtggaggaagagggcgaggacgaggtaga
ggtagaggtggaaatgcggggggtcgaggagattattctgataatcaaagtcagtcaaat
aatagaaaacggaaaagaaatgaatctacaggaaaacgaagatgtggcaattgtggagaa
gaaggtcatacgaaacccaagtgtcctcacaaatag
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