Chrysoperla carnea: 123295060
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Entry
123295060 CDS
T09255
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccrn03037
]
123295060
Cilium and associated proteins [BR:
ccrn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123295060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
CCDC39
FKBP15
AAA_13
ERM_helical
GAS
ATG16
GbpA_D3
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
123295060
NCBI-ProteinID:
XP_044732208
LinkDB
All DBs
Position
1:131728326..131774774
Genome browser
AA seq
2122 aa
AA seq
DB search
MITNTKLNLPRNRSAVYCPTTFQTEQKYFLNIYERDENMQKIIKYDKSIHEDKRYNNKNE
NIDQTTWTPSVVVSNIVTSGVFDCTSTELGTVTVNNDGLSSSVVKTTAKTMPRFPIKKEP
LSPTYLTRSMDRKRPHFLRSPKSKSTERPSILSSAGTSRIERPPSVARGRAEGGRGESSG
EDQRDGSPDTLYRQNLELRHRLEEEASNYKRRLDTYRQAQQHQAALVSRLQAKVLQYKQR
CSELEHQMVESIPPRDDICSRPTSLPPPASTALPGSALDQAQQHLREIREERIHDLETAL
KRLDEERRRNDKIMQLNAALRQQLEESHKTNEALTSDLQKLTNDWEDLREEMIIKEDEWK
DEEQAFTDYYTTEHNRLLGIWRDVVSVKRLFTEVQSSTERDLEKLRTQITSASRDIQTAC
NTVTTQTYLNGDLSSLLQVEGAKPHYKWESEMSELRSQIESFRLQYDAAQNEIRHRDERV
QQLLREVATLEDRCNDAEQNISQMANVQEEVEILQSALRDIAHIVLQDAESHDDDVSHIH
LTPAPSVPQRSPKRSSSKHATPAFAEGTISAVQAALHKYQLLIHELRVKLQSNKEQLILV
RKQCQNSDENNVALEGRIGELTALLDACRGNCSQLTQERDTLQKALDALRTEKNALDKNR
SEINFMYESLQSDYEKLQKNNARLQKLVDSLEDEKLFLQGETDRLQKEGDIREISLRNEE
DRNSRLREEILILKDECEKLYLNKDMLEQQKMEADALISHLEKNKSDLEMDLEKTIYERN
TYQEALAKAENAGSATEGDKQKVQAELKKVEEEKAILQSQCTDQQNDLISLRKELLQAEQ
TRLDLEADKQTLNERIKFLEMEKDKTEMELGQVTRERSDLNNQLTVLSRKKEALNEDLMR
VHQRLEQANEMNARINRNLEDLVKENEEKQVMLEKNDKEIQRLQEQLAASRTEKEALEAV
LFDTQTNLEDTEVKRAHLEKDQQDLLIQKEKLKGQIARLTRELEQSEKRCRDVKQSLTKQ
AGNQEAEFKSTLANIKKQHEDYTKKLLEEKEFIRSSLEKKLQQTVSQLTNEKDTEIQQLR
DRIESLQQHIENICQQHEEVLLRAENDKQQALLLAHHDMQALQERLEEVRRELEAERGAL
ERLRRESSTRVEQDRGTINQLREELNKMKSKLEECKHKGEEERIRLEMRIEEIRKEREDC
NQKAEELKVQLHLTEDKADGLTNQLQETTRKLKEVENTSEALRKELTDVRRQLTDSNYEK
EKYHSSNKELREHVKRAETDKRETNRSLEEAFQKIASLEEIRTALENEKTRLQGEIRDAE
REQTNTEQRLREAQEEIQKAGSNATQQQAQERELQSQLANESEERERAQQEVHQLKKQLV
ELESNLEATRQEMGRLRARGAEREERGHGREQELLARLEDSRVREKRLEDQKHNLEVCLA
DASQQIQELKARLGGAEGRIRALDAQLAQCEAHKRDIEQRLSSVGSTLRRIAGIQLDGSV
AIPYRLLSPSRRWSPARGEHPERGEGLIEVDPEVVRKGVRNLMQQVAQIERERDDYKTQV
ANCKKQLMELSENQSKGESKLNTIVTSLRNIQEEKGSLEAKLGQKQAALHAHSEALKQKT
DEVNQMREKITNLELALQTSNEDKSQCDDKCEKLRGQVARLENEKRGLQDELSRSEARSG
KLELQRVSLEGDIQRLQMMLQDKEAAIQKLQERCEGQSRTVVSLEERCASLKSTIDQLNI
SLERAAGCENDLRSEIQALQRALLETSTMSQSSTEKLKQVFSGIVSEIQLLQKSLINAEN
ERRVLAERLDHSQQNAAELRRAKEQLEDVVQHLRNDIASNEVQRAGLESQLRLAVQWPPD
SPSISVDERTSSAHRYIRTHERHDEELSRQLATTQRERSELRGKVDAMAEKIRQLETDKR
SLERAITTAKSARSKSYERPEKPVIYGEVDSSTECLHHEQEIRELRLKVRRLESQLAEKE
AEITRLRIRPEYKYDRSEIERARAAQLQAERLLEAREQSHRQHILRLENQVQMLRDQLNQ
EIKRRQQYVLRSTRAGREMQQLRQTLGESLRTVSQDPTLDALLLEHETRKLDNTIASSAS
LPPGLSIPSSHYETRSITPQPK
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atgataacaaatacaaaattaaatttaccacgaaatcgttcggccgtttattgtccgaca
acctttcaaacagaacaaaaatattttttaaatatttacgaacgtgatgaaaatatgcag
aaaattattaaatatgataaaagtattcatgaagataaaaggtataacaataagaatgaa
aatatagatcagacgacgtggacgcctagcgtcgtcgttagtaatattgtgactagcggt
gtgtttgattgtacgtcgacagaacttggtacagtgacggtaaataacgacggtttatca
tcatctgtagtgaaaactaccgccaaaactatgccacgttttccgataaaaaaggagcct
ttatcaccgacatatttaacacgatctatggacagaaaacgaccacattttttaaggtca
ccaaaatctaaatcaacagagagaccgtccattttaagttcagctggcacaagtcgaatt
gagcgtccaccttcagtagcgcgaggtcgtgctgaaggtggacgtggtgaaagttctgga
gaagatcaaagagatggaagcccagatacactgtatcgtcaaaatttagaattacgccat
cgactcgaagaagaagcatcgaattataaacgacgtttggatacctataggcaagctcaa
caacatcaagctgcacttgttagccgtttacaagcaaaagtattacaatataagcaaaga
tgttccgaattagaacatcaaatggtcgaaagtataccaccgagagatgatatatgttct
agacctactagtttaccacctcctgccagcacagccctgccaggttcagcattagatcaa
gcacaacaacatttacgtgaaattcgtgaagaacgaatccatgatttagaaacagcattg
aaacgccttgatgaagaacgtagaagaaatgataagataatgcaattaaacgcagcttta
aggcaacagttagaagaatcacataaaacaaatgaagcacttacatccgatttacaaaaa
ttaacaaacgattgggaggacttacgagaagaaatgattatcaaagaagatgaatggaag
gatgaagaacaggcattcactgattattatacaaccgagcataacagattattgggaata
tggcgtgatgttgtatccgtaaaacgtttgttcactgaagttcaatcgagcaccgaacgc
gatttagaaaaactacgtacacaaattacatccgctagtcgtgatatacaaaccgcttgc
aacacggtaacaacacaaacatatttaaatggtgatttatcgtcgcttcttcaagtcgaa
ggagcgaagccacattataaatgggaatctgaaatgtcagaactgcgttcacaaattgaa
tcgttccgattgcaatacgatgccgcccaaaatgaaatacgacatcgtgatgaacgggtt
caacaattattacgtgaagtggccacgttggaagatcgatgcaacgatgctgagcagaat
atatcacagatggcgaatgtacaagaagaggtggaaatcttacaatcggctttacgtgat
attgcacatattgttcttcaggatgctgaatcacatgatgacgatgttagtcacatacat
ttaacaccagctccatcagttcctcaaagatcacctaagcgttcttcatcaaaacatgca
acaccagcttttgctgaaggaactatttctgctgttcaagcagctttacataaatatcaa
ttactgatacacgaattacgtgtgaagttgcaatcgaataaagaacaattaatattagtt
cgaaaacaatgccaaaattcggatgaaaataatgtagctttagagggaagaattggtgaa
ttaaccgcactattagatgcttgtcggggaaactgttcacaattaactcaagaacgtgac
acgctacaaaaggctttggatgcattgcgtacagaaaagaatgcgttggataaaaatcgg
tcagaaattaatttcatgtatgaatcattacaatcggattacgaaaaactacaaaagaac
aatgcaagattacaaaaattagtcgacagtttagaggatgaaaaactatttttgcaaggt
gaaaccgatcgtttacaaaaagaaggtgatatacgtgaaatctcattacgcaacgaagaa
gatcggaacagtcgattgcgtgaagaaatactgatattgaaagatgagtgtgaaaaactt
tatctgaataaggatatgctggaacaacagaaaatggaagcagatgcattgattagtcat
cttgaaaagaataaaagtgatttggaaatggatttggaaaaaacaatttatgaacgaaac
acatatcaagaagctttagcaaaagcagaaaatgccggcagtgcaactgaaggagataag
caaaaagttcaagctgaattgaaaaaggtcgaagaagaaaaagcaattttacaaagtcaa
tgcacagatcaacaaaatgatttgatttctttacgaaaagaattgttacaagcggaacaa
acacgcctagatctagaagccgataaacaaacattaaacgagcgtattaaattcttagaa
atggaaaaagacaaaaccgaaatggaattaggacaagttacacgtgagcgaagtgactta
aacaaccaacttaccgtactctcacgtaagaaagaggcattaaacgaggatttaatgcgt
gtacatcaaagattagaacaagcaaatgaaatgaatgcacgaatcaatcgtaatctagaa
gatcttgtaaaagaaaatgaagagaaacaagtgatgctagaaaaaaatgataaggaaatt
caacgtttacaagagcaattagcagcatcacgtacggaaaaagaagctttagaggcggtg
ttgttcgatacgcaaacaaatctcgaagatactgaagttaaacgagctcatcttgaaaaa
gatcaacaagacttgttaatacaaaaagaaaaattgaaaggtcaaatagcacgtcttact
cgcgaactagaacaatcagaaaaacgatgtcgtgatgtaaaacaatcgttaacgaaacaa
gctggaaatcaagaagctgaatttaaatcaacacttgcaaatattaagaaacaacatgaa
gactacacaaagaaactactcgaggagaaagaatttattcgaagtagcttagaaaagaag
ttacaacaaactgtttcacagttaacgaatgaaaaagataccgaaattcaacagttacgt
gatcgaattgaatcacttcaacaacatatcgaaaatatttgtcaacagcatgaagaagtt
ttgctccgtgctgaaaacgataaacaacaagcgttattattagctcatcatgacatgcaa
gcattacaggaacgtttagaggaagtacgacgtgaattagaagcagaacgtggtgcttta
gaacgtttgcgtcgggaatctagcacacgcgttgaacaagatcgtggtactattaatcaa
ttgcgcgaagaattgaataaaatgaaatctaaattagaggaatgtaaacataagggtgaa
gaggaacgtataagattagaaatgcgtattgaagaaattcgtaaagaacgtgaagattgt
aatcaaaaagcggaagagttaaaagtacaattgcacttaactgaagataaggcagatggt
ttaacaaatcagttgcaagaaactacacgaaaattaaaagaagttgaaaatacaagcgag
gctttacgaaaagaattaacagatgttcgaaggcaattaacagacagtaattatgaaaaa
gaaaaataccatagttcgaataaggagttgcgagaacatgttaaacgagctgaaaccgat
aagcgagaaacaaaccgaagtcttgaagaagcgttccagaaaattgcaagcctagaagaa
atacgaacagctttagaaaatgaaaaaactcgattgcaaggcgaaattcgtgatgcagaa
cgtgaacagactaacactgaacaacgcttgcgtgaagctcaagaagaaatacaaaaagct
ggttcaaatgccacccagcaacaagcccaagagcgtgagttacaatcacagctagccaac
gaatctgaggaacgtgaaagagcccaacaggaagttcatcaacttaaaaaacaattggta
gaattggaatcaaacctagaagcaactcgtcaagagatgggtcgtctacgtgctagaggt
gcggaacgtgaggaaagaggtcatggacgagaacaagagttattagctcgtttagaagat
agtcgcgttcgagaaaaacgtttagaagatcaaaaacataatttagaagtatgtttagcc
gacgcttcccaacaaattcaagaattgaaggcacgtttaggtggagctgaaggtcgaatc
cgtgcattggatgcacaattagcacaatgtgaagcccataaacgtgacattgagcagcgt
ttatctagtgttggttcaaccttacgtcgaattgctggtattcagttggatggtagtgtt
gcgattccataccgtttactaagtccatctcgtcgatggagtcctgcacgaggagaacat
cctgaacgcggagaaggtttgattgaagttgatccagaagtggttagaaaaggcgttaga
aatttgatgcaacaagttgctcaaatagaacgagaaagggatgactacaagactcaagtg
gctaattgcaaaaaacagttaatggaattatctgaaaatcaaagtaaaggtgaaagtaag
ctgaatacgattgtaacttctttgagaaatattcaagaggaaaaaggatcacttgaagcg
aaactaggacaaaaacaagcagctcttcatgcacatagtgaagcattaaaacaaaaaact
gacgaagtaaatcagatgcgagaaaaaattaccaacttagaattagcattgcaaacatca
aatgaagataaatcacaatgtgacgataaatgtgaaaaattacgtggacaagttgctcgt
ttagaaaatgaaaaacgtggtttacaagatgaactaagtcgttccgaagcgcgttctggt
aaattagaattgcaaagagtttcgttggagggtgacatacagcgtttacaaatgatgtta
caagacaaagaagctgcgattcaaaaactgcaagaacgctgcgaaggccaaagtcgaaca
gtagttagcttagaagagagatgtgcatcattaaaatcaactatcgatcaattaaatata
tcattagaacgagctgcaggttgtgaaaatgatcttcgaagtgaaattcaggctttacaa
cgagcattattagaaacaagtacaatgtctcaatctagtactgaaaaattgaaacaggta
tttagtggaattgtatccgaaatccagttgctccaaaaatcattaataaatgctgaaaat
gagcgtcgagtattggctgaacgattagatcatagtcaacaaaatgctgcggaattgaga
cgagcgaaagaacaattagaagatgttgtacaacatttgagaaatgatatagccagtaat
gaagtgcaacgtgctggtttagagtcacaattacgtttagctgttcaatggccaccagat
agtccatcaatttctgtagatgaacgtacaagctcagctcatcggtacatacgaactcat
gaacgacatgatgaagaattatcaaggcagttggcaacaacgcagagagaacgaagcgaa
ttaagaggcaaagttgatgcaatggcagaaaagattcgacaactagaaactgataaacgt
agcttggaacgtgctataacaactgcaaaatcagctcgaagtaagagctacgaacgtcca
gaaaaacctgtaatttatggtgaagtagactcgagtacagaatgcttacatcatgaacag
gaaatacgtgaacttcgattaaaagttcgtcggttagaatcacaattagctgaaaaagaa
gctgaaattacacgacttcgaatacgtccagagtacaagtatgatcgttctgaaattgaa
cgggcacgtgcagctcaattacaagcagaacgattattagaagccagagaacaaagtcat
cgtcaacatattcttcgtttagaaaatcaagtgcaaatgttacgtgatcaattaaatcaa
gaaattaaacgtcgccaacaatacgtgctacgaagtacgcgtgctggtcgtgaaatgcaa
caattacgtcaaacattgggtgaatcgttacgtacggtatcacaagatccaacattggat
gcgttactattagagcatgaaacacgaaaacttgataatactatagcaagctctgccagt
cttccaccaggactctcaataccttcctctcattatgagacccgttcaataacgccacaa
cccaaataa
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integrated database retrieval system