Chrysoperla carnea: 123295650
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Entry
123295650 CDS
T09255
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123295650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123295650
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
123295650
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
DUF2610
Motif
Other DBs
NCBI-GeneID:
123295650
NCBI-ProteinID:
XP_044733003
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Position
3:complement(77309658..77316417)
Genome browser
AA seq
244 aa
AA seq
DB search
MNGITNNQKDSTPAKTNNLAGSGSGWPKRNGHTIKSEINNSITSLNQLAINRAINLYPLT
NYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVHEHGLTHVLLLQLGTTF
FKLPGGELAPGEDEVEGLKRLLTETLGRQDGIIQEWLVEDIIGNWWRPNFEPPQYPYLPP
HITRPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFN
FIYM
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggataacgaataatcaaaaagattcaacacctgcaaaaacaaataatctagca
ggaagtggttctggatggccaaaacgtaatggtcatactattaaaagtgaaataaataat
tcaataacctctttaaaccaattagcaataaatcgtgcaataaacttatatccgttaaca
aattatatatttggaacaaaagaacctttatttgaaaaagatccaagtgtacctgcacga
tttcaacggatgcgagatgaatttgagcgtattggaatgcgacgaagtgttgaaggagtt
ttattagtacatgaacatggattaactcatgtacttttgttacaattaggtacaacattc
ttcaaattacctggtggtgaattagcacctggtgaagatgaagttgaaggattgaaacga
ttattgaccgaaactcttggtaggcaggatggcatcatacaagaatggttagtggaagac
ataatcggtaattggtggcgacctaatttcgaaccaccacaatatccgtatttgcctcct
catatcacacggccgaaagaacacaagaaattatttcttgtacaacttcaggaaaaggcg
ttatttgcagtacccaaaaattataagttagtagcagcgccattatttgaactttacgac
aattcacaaggatacgggccaattatatcgtcactacctcaagctctttgtagattcaat
ttcatttatatgtaa
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