Chrysoperla carnea: 123295935
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Entry
123295935 CDS
T09255
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn04140
Autophagy - animal
ccrn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123295935
04148 Efferocytosis
123295935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccrn04131
]
123295935
Membrane trafficking [BR:
ccrn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123295935
Hops complex
123295935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
COG2_N
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
123295935
NCBI-ProteinID:
XP_044733331
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All DBs
Position
3:complement(23978093..23983588)
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AA seq
840 aa
AA seq
DB search
MSAMLTADWCLLGNIDTYYRKFEVYSMFGNPEMNLENALIAVAPFGGPIALVRDRNKFVQ
IHGGGKPVIAIYSGSGKQISSVVWSSGLIVALGWTHNEYLLCIQEDGMVFVYDIFGKFQV
HVSMGQEARDHKVMDAKVFYTPQGTGVAVLTSNFKIILVNDIKVPKVRQLSQLPVSLTGA
INWEVIFEKRDPEILLVCSVTPDLYRFTQGDTMALAHANPTSEGNILDIAVTVNNEGRST
AVALFTDAGYLWIGSVDLRTKYSEVLLDKRTAPKQMMWCGGEAVVCYWPGLIILVSRQSE
GDKISFSYDTPLFLAQELDCVRIITNHQHEILQKVPPIVQRVLRINSIDPGSYLLEASKH
FQKRSHRADEYIGLIKDKLDEAVTQCIEAAGYEFDPEVQKMLMRAAQFGKCFIADEFDPN
NFVQMCRELKVLNTVRDRRIGIPLTYTEMHARKYHNLLDRLVTRGFYYHAIQIAKHLRLP
NEEGANRIYVHWACYKVTQSQLEWDEIAQQIANKLGHSPGISYSDIASKAEEFGRTKLAI
KLLDYEPRARKQVPLLLKLKENKPALLKAIESGDTDLVYTVIFHMRENTPLADFQMIIRN
FPMALSLYLKYCRDHNPQALFDIYHQEDNFNAQAAEYIRESFEPKNALSREPSLAAAQDA
YKTARNDINASLCEESIRLLRHQKQFEEKFPRNKFIGKSVHDTLYLLLTINELKLAEKMR
NEYKVPDRRYWWLRIQTLGEQGEWSELDKFSKSKKSPVGYAPFVDVCLKYDNTSEAVKYL
PKVREDLKIKYYVKAKKFEEAAQIAYEQKDRQGLLYVQSKCGNKPAIVSKINVYVSQLPK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatgttaacagccgactggtgtttgctgggtaatattgatacttattatagg
aaatttgaagtatactcaatgtttggaaacccagaaatgaatttggagaatgcattgata
gcggttgcaccgtttggtggaccaattgctctagttagagatcggaataaatttgttcaa
attcatggtggtggaaagccagtaattgctatttactccggatctggaaagcaaatatct
tcagttgtgtggagcagtggacttattgtagctttaggttggacccacaatgaatattta
ttatgtattcaagaagatggtatggttttcgtttatgatatctttggaaagtttcaagta
catgttagtatgggtcaagaagctcgtgatcataaggtaatggatgcaaaagtgttttat
acaccacaaggaactggtgtagctgttttgacttcaaattttaagattattttggttaat
gatatcaaggtacctaaggttcggcaactttcccaacttccagtttctctaactggtgca
ataaattgggaagtgatttttgaaaaacgtgatccagaaatattattggtttgttctgtt
acaccagatttgtatcgttttactcaaggtgatactatggcgttagctcatgctaatcca
acatctgaaggaaatattttggatattgctgttactgttaacaacgagggacgatctact
gcagttgctttatttacagacgctggttatttatggattggaagtgtagatttacgaacg
aaatatagtgaagtacttttggataagcgtacagctcccaaacaaatgatgtggtgcgga
ggtgaagcagttgtatgttattggccaggattgataattttagtaagtcgtcagagcgaa
ggtgataaaataagtttctcatatgatacaccattgtttttggctcaagaattggactgt
gttcggattataacaaatcaccaacatgaaattttacaaaaagtccctccaattgttcaa
agagttcttcgtatcaatagtattgaccctggtagttatttactagaagcgtccaaacat
ttccagaaaagaagtcatcgagccgatgaatacattggtttgattaaagataagctagat
gaagctgtaactcaatgcattgaagctgccgggtatgaatttgatcctgaagttcaaaaa
atgttgatgcgagcagcacaatttggaaaatgttttatagctgatgaatttgatccaaat
aattttgttcaaatgtgtagagaactaaaagtattaaatactgttcgtgatagacggatt
ggcatacccctcacgtacactgaaatgcatgcgcgaaaatatcataacttattagatcga
ttggtgactcgaggattttactaccatgctatacaaatagcaaaacatcttcgactaccc
aatgaagaaggtgcgaacagaatatatgtgcattgggcgtgctataaggtaacacaatct
caattagaatgggacgagatagcccaacagattgctaataaattaggccactcaccgggg
atatcatatagtgatattgcaagtaaagcagaagaatttggacgtacaaaattggcaatc
aagctattagattatgaaccaagagctcgtaaacaagttccattattattaaaactaaaa
gaaaataaaccagctttattaaaagctattgaaagtggagataccgatttagtgtacaca
gtaatatttcatatgcgtgaaaatacaccattggctgattttcaaatgattattcgaaat
tttccaatggctttgtcattatatttgaaatattgtagagatcacaatccacaagcttta
tttgatatttatcaccaagaagataattttaatgctcaagccgcagaatatattcgagaa
agttttgaaccaaagaatgcattaagccgagaaccgtcgttagcagcggctcaagatgcg
tataaaactgctcgaaatgatatcaatgcttcattatgtgaagaatctattcgattatta
cgtcatcagaaacaatttgaagagaaatttccaagaaataagttcattggaaaatctgtt
catgatactttgtacctactgttaactattaacgaacttaagttagcagaaaaaatgcga
aatgaatacaaagtaccagatcgacgatattggtggttaagaattcaaacactgggcgaa
caaggagaatggagcgaattagataaattttcgaaatccaaaaagtcacctgttggttac
gcaccatttgttgatgtttgtttgaagtatgataatacttcggaagccgttaaatattta
ccaaaagttcgagaagatttgaagatcaaatattacgtgaaagctaagaaatttgaagaa
gcagcacaaatcgcttacgaacaaaaagatagacaaggtttattatatgtacaatcgaaa
tgtggcaataaaccagcaatagtcagtaaaattaatgtatatgtttctcaactacctaaa
taa
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