KEGG   Chrysoperla carnea: 123296099
Entry
123296099         CDS       T09255                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ccrn  Chrysoperla carnea
Pathway
ccrn03030  DNA replication
ccrn03410  Base excision repair
ccrn03420  Nucleotide excision repair
ccrn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccrn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123296099
   03410 Base excision repair
    123296099
   03420 Nucleotide excision repair
    123296099
   03430 Mismatch repair
    123296099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccrn03032]
    123296099
   03036 Chromosome and associated proteins [BR:ccrn03036]
    123296099
   03400 DNA repair and recombination proteins [BR:ccrn03400]
    123296099
DNA replication proteins [BR:ccrn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123296099
  DNA Replication Termination Factors
   ELG1-RFC complex
    123296099
Chromosome and associated proteins [BR:ccrn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123296099
DNA repair and recombination proteins [BR:ccrn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123296099
  Check point factors
   HRAD17(Rad24)-RFC complex
    123296099
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_22 AAA_14 Rad17 AAA_16 Mg_chelatase RuvB_N Viral_helicase1 nSTAND_NTPase5 AAA_assoc_2 AAA_11 AAA_19 nSTAND3 AAA_18 AAA_24 MeaB AAA_23 ABC_tran DNAX_ATPase_lid AAA_5 NTPase_1 AAA_25 DUF1217 AAA_28 IstB_IS21 RNA_helicase AAA_29
Other DBs
NCBI-GeneID: 123296099
NCBI-ProteinID: XP_044733495
LinkDB
Position
3:complement(51519628..51522154)
AA seq 359 aa
MPSEDESMDVEVVDITNEQPSTSSKSEKNKSGHLPWIEKYRPQKFEDIVGNEDTVARLAI
FAKNGNTPNIIIAGPPGVGKTTTILCLARIMLGPSFKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTEGAQQALRRTMEIYSNTTRFALACNNSEKIIEPIQ
SRCATLRYSVLSDAQILAKIITVCQSENLKYTDDGLEAIVFTAQGDMRQALNNLQSTANG
FGEISSENVFKVCDEPHPLLVKEMLMHCVNGEIQKAYKIIAHLWNLGYACEDLIANIFRV
CKNLDINENLKLAFIKEIGITHMRIVDGLSSLLQLSGLLARLCDVGVKLKTEDSFKIRK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgccatcagaagatgaaagtatggacgtggaagtagtagatattacaaatgaacaacct
tcaacttctagtaaatcagaaaaaaacaaatctggacatttaccttggattgaaaaatac
agaccacaaaagtttgaagatatcgttggaaatgaggataccgttgctcgtttagctata
tttgctaaaaatggaaatacaccaaacataattattgcgggcccacctggtgttggaaaa
acaaccacgatattatgtctagcgcggattatgttaggaccatcgtttaaggatgccgtt
ttagaattaaatgcttcgaatgatcgtggaatagatgtagttcgtaataaaataaaaatg
tttgctcaacaaaaggtcacattacctaaagggcgacataaaattattattttggacgaa
gcagacagtatgaccgaaggtgcccaacaagctttacgtcgtacaatggaaatttacagt
aacacaactcgttttgcacttgcctgtaacaacagtgaaaaaataattgagccaattcaa
tcacgctgtgcaactttaagatactctgtattatcagatgctcaaattttggcgaaaatt
ataacagtttgtcaaagtgaaaatttaaaatatacggatgatggcttagaagcgattgta
tttactgctcaaggtgatatgagacaagctttgaataatttacaatcaacggctaacgga
tttggcgagatttcaagtgaaaatgtatttaaagtttgcgatgaaccacatccgttgcta
gttaaagaaatgttgatgcattgtgttaacggggagatacaaaaagcttacaagattata
gcacatttatggaatcttggatatgcatgcgaagatctgattgcaaacatatttcgagtt
tgcaagaatttagatatcaatgaaaatttaaaattagctttcataaaggaaattggtatt
actcatatgcggatagtagacggattaagttcattattacaattatcaggattattagca
cggttatgtgatgtgggagtgaaattaaaaactgaagatagttttaaaataagaaaataa

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