Chrysoperla carnea: 123296315
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Entry
123296315 CDS
T09255
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03022
Basal transcription factors
ccrn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123296315
09124 Replication and repair
03420 Nucleotide excision repair
123296315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123296315
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123296315
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123296315
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123296315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
FYVE
WWE_4
Motif
Other DBs
NCBI-GeneID:
123296315
NCBI-ProteinID:
XP_044733711
LinkDB
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Position
3:87061968..87064652
Genome browser
AA seq
407 aa
AA seq
DB search
MGDEEDAKEYRWETGYEKTWEDLKENEDGLLEASVADIIQRAKRKRQAQKKGNTKLGMMR
HLYILLDCSESMSNQDLKPTRHLCTLKLLEGFVEEFFDQNPISQLGVIILRNKRAEKIID
LAGNSRKHVKIIHGLNTTALIGEPSLKNGLDLALKSLKVLPSHASREILVILGSLTTCDP
GDITVTIDVLKTEGVRCSVIGLAADILVCRQLTLETGGLYGVILDDCHYRDQLFQHIDPP
AAAVCLESSLIKMGFPHNLVTERKEEPLTMCMCHVDSTDEASKLTTGGYYCPQCSSKYCE
LPVECRACGLTLVSAPHLARSYHHLFPVDPFTEIDNENQVEICYACQKNFTDTDKHVYRC
EICKQIFCIDCDIFVHETLHTCPGCASNPKTFQHNTTDHLSNSNHGK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaagaagatgctaaagaatatcgctgggaaactggttatgaaaaaacttgg
gaagatttaaaagaaaatgaagatggattacttgaagcatcggtcgctgatattatacaa
cgggccaaacgaaaacgacaagcacaaaagaaggggaatacgaaattgggcatgatgcgg
catttgtacattcttttagattgttcagaatctatgtccaatcaagatttaaaaccaact
aggcatttgtgtaccttaaaattattagaaggtttcgtagaagaattcttcgatcaaaat
ccaattagtcaattaggtgtaataattttgcgtaataaacgagcagaaaaaataatagat
ttagctggaaatagtcgtaaacatgtaaaaataattcatggtttaaatacaactgccttg
attggggaaccatcgttaaagaatggattagatcttgctttaaaatcgttaaaagtctta
ccatcacatgccagtcgagaaatattagtcattctaggaagtttaactacatgtgatcct
ggcgacattacagtgactatcgatgtattaaaaactgaaggtgttagatgttctgttatc
ggtttagccgcagatattcttgtttgtcgacaactaacacttgaaactggtggtttatat
ggcgttattttggatgattgccattatagagatcaattatttcaacatattgacccacct
gcagctgcagtgtgtttagaatcgtctttaattaaaatgggatttccacataatttagtt
acagagagaaaagaagaacctttgaccatgtgcatgtgccacgtggatagtacagatgaa
gcaagtaaattaaccactggtggttattattgcccacaatgttcaagtaaatattgtgag
ttgcctgttgaatgccgtgcttgcgggctaacgttagtatcggcaccacatctagccaga
tcgtatcatcatttattcccggttgatccatttactgaaattgataatgaaaatcaagtt
gaaatttgttatgcttgccagaaaaattttacagatacagataaacacgtttatcgatgt
gaaatttgtaaacaaatattttgtattgattgtgatatatttgtccacgaaacattacac
acatgtccaggatgtgcgtcaaatccaaaaacatttcaacataataccacggatcattta
agcaattccaatcatggaaaataa
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