Chrysoperla carnea: 123296514
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Entry
123296514 CDS
T09255
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123296514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123296514
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123296514
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123296514
Coactivators
SAGA/TFTC/STAGA complex
123296514
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123296514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
123296514
NCBI-ProteinID:
XP_044733941
LinkDB
All DBs
Position
3:27673141..27684937
Genome browser
AA seq
961 aa
AA seq
DB search
MASAKFLEEALRSDVDESAVNAIVGSLEDQLVTSSPVVSSHQTISSVINQNHLNSAISNG
GNTQKHGVANGESVIDSNKINSSSHIQTTITSNAVSTVVASMSGGAQSIPNSFINQLSTN
VSSAQLSNMSKTNEGIKLVYPPGTQTINNRVTFPSQTLPNGTIGLSPLSQQTVHPIQTST
TNVHKQPAIVIKTSATPGTPGLVTVPMSVTTSIVNSVGTSMPVTSMPGVMTIAKPLNNVV
TAGGQQTMVATPGQQTAIIPNVQIVNVRPGTPNQGQKNMPPRVVLGSPHVIGARQGPITI
QSLQQLQPGQQGHLLLKTENGQYQLLRVGPAPPTPSGALPAGATQAAASGTQQTTYRLQT
VPAVSRLNTQFTGPPLTIRKTIVQQAPTTVTTTPTATPISTHQQQPIVPTSTTLVNSNQT
ISTGAPIVTQTTPKQSLDNTKEKCRKFLANLLELSSREPKNVEKNVRTLIQELIDMKVEP
EEFCDRLERLLNASPQPCLIGFLKKSLPLLRQSLVLKEMVIDGIKPPPSHIVFSLANSTP
SITSTVQVQTASGIRPALPTQVRLMAPGGATTVVRPGVQPRLATPTIRGQSPQPRMITTT
TLRQQTPFTTNNVIVPASQPPALHPVSGAPPLFPTSGAQVRVACVRPQMQQVRQQTPNQQ
IRSPAPVRTATPKTTPAKPSVPSTSTKVATKEKEKKSSSFASSVNYAPDDDINDVAAMGG
VNLAEETQRILGSTEFVGTQIRSCKDELFLHVGPLQQRLRQITQSHGLEDASGDIAAIVS
HATQELLKNMVEKLALVAEHRIEIMKSDSRYEVTHDVRAQLKFLEELDRAERKRHDEQER
ELLIRAAKSRSKNEDPEQAKLKAKAKEMQRAELEELRQREANLTALQAIGRPKKKPRLDN
ENGSGSTQVNAGASGSGISSGRNQMPFRPRLKRANLRDLLCLLEQEKDKCKSTMLYQAYL
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctcgaggaagctcttagatcagacgtcgacgagtcggcagtg
aatgcaatagtgggttcattagaagatcaactagttacatcgtcgccagtagtttcaagc
catcaaacaatttctagtgtaattaatcaaaatcatttgaacagtgcaatatcaaacggc
ggcaatactcagaaacatggggttgctaacggtgaatcggtgattgattcaaataaaata
aactcatcaagtcatatacaaactacaataacgtcaaatgcagtcagtacagtggttgct
tcgatgtcagggggtgctcagagcatccccaatagttttattaatcaattgtctacaaat
gtatcatcagcccaactaagtaacatgtccaaaacaaatgaaggtatcaaattagtatat
ccaccaggaacacaaacaataaacaatcgtgtgacatttccttcacagacattaccaaat
ggaacaataggtttaagtccgttatctcaacaaacagtgcatccgatacagacatctact
acgaatgtacataaacaacccgcgattgtgataaaaactagtgctaccccaggtacacct
ggtcttgtgactgtacctatgagtgttacaacgtctattgtgaatagtgtaggaacgtct
atgccagtgacaagtatgcccggagtgatgactattgcaaaacctttaaataatgttgtt
actgcaggaggtcaacaaaccatggtagctacacccggacaacaaactgctattattcca
aatgtacaaattgttaatgtacgacctggaacaccaaatcaaggacaaaaaaatatgcca
ccaagagtggttcttggtagcccccatgttattggagccagacaaggaccgataacaatt
caaagtttacaacaattacaacccggacaacagggtcatctcttgctaaagactgaaaat
ggtcaataccaattgttacgagttggtccagcaccgccaacaccaagtggtgcacttcca
gccggcgcaacgcaagctgctgcatccggtacacaacaaacaacatatcgtctacaaacg
gtacctgcagtaagtaggctgaacacgcaatttacgggacctccattgactattcgaaag
actatcgtccaacaggcaccgacaacagtaaccacaacaccaacagcgacaccaattagt
acccatcaacaacaacctattgtacctacatcgacaacattagtaaattcaaatcaaaca
atatcaactggtgcgccaattgttacgcaaaccactccaaaacagtctttagataatacc
aaagaaaaatgtcgcaaatttttagctaatttgcttgaattgtctagtcgtgaacccaag
aatgttgaaaaaaatgttcgaacattaattcaagagctcatcgatatgaaagttgagcca
gaagagttttgtgaccgactagaacgactattaaatgcatctcctcaaccatgtttaatt
ggttttttaaagaaaagtttacctcttttaagacagtcactagtgttaaaagaaatggta
atcgatggtataaagccaccccctagtcatattgtgttctctttggcaaattcaacgcct
tcaatcaccagtacggtacaggtacaaacggcaagtgggatacgacctgctttacctaca
caagttagattaatggcacctggcggagcgacaacggtagtacgacctggtgttcaacca
cgactggctacccctacaatcagaggacaaagtccgcaacctcgaatgataacaactaca
acattgagacaacaaacaccttttactacgaataatgtcattgttccagcatcacaacca
ccagcattacatcctgtgtcaggtgcaccaccattatttccaacaagtggggcacaagta
cgagttgcctgtgtaagaccccaaatgcagcaagtgagacaacaaacaccaaatcaacaa
atacgatcacctgcaccagtacgaactgccacaccaaaaacaacacctgcaaaaccttca
gtgccttcaacatcaacaaaagttgcaacaaaggagaaagagaaaaaatcatcatcgttt
gcatcatcggtgaattatgcgcctgatgatgatattaatgatgtggccgccatgggtggt
gttaatttggctgaagaaacacagcgaatattgggctcaacagaatttgtaggtacacaa
atacgatcttgtaaggatgaattatttttacatgttggaccgttgcaacaacgattgcga
caaatcacacaatcacatggtttagaagatgcgtctggtgatattgcagcaattgtatca
catgcaacgcaagaattattaaaaaatatggtcgaaaagttagcattagttgcagaacat
agaatagaaattatgaagagtgattctagatatgaggtaacacatgacgtgagagcacag
ttaaaatttttagaagaattagatcgggcggagagaaaacgacatgacgaacaggaacgt
gaactattaataagagcagcaaaaagtcgttctaaaaatgaagatcctgagcaagccaaa
ttaaaagcaaaagcaaaagaaatgcaacgtgctgagttagaagaacttcgacagagggag
gcgaatcttactgctttacaagctattggtcgtcccaagaaaaaacctcgacttgacaat
gaaaatggtagtgggtccactcaggttaacgctggcgctagtggtagtggaatatcaagt
ggaagaaatcaaatgccattccgaccgcgattaaaacgcgcaaaccttagagatttatta
tgtttactcgaacaagagaaagacaaatgtaaaagtacgatgttatatcaagcgtatctt
aagtga
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