| Entry |
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| Name |
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ccrn00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123296821
09124 Replication and repair
03420 Nucleotide excision repair
123296821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ccrn03021]
123296821
03400 DNA repair and recombination proteins [BR:ccrn03400]
123296821
Enzymes [BR:ccrn01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123296821
Transcription machinery [BR:ccrn03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123296821
DNA repair and recombination proteins [BR:ccrn03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123296821
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:93042099..93048183
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| AA seq |
1175 aa
MYDEEEDVYDEGAGEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIELQAEAQHTSGEMENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKEGEEPIVTQHQKTFIGKIPIMLRSSFCLLSKLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKSEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLDLAIKTKMITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLIIVENGSLLLKKSHIDMLKDREYNNYGWQGLVGSG
VVEYIDTLEEETTMIAISPDDLRNSKEYAYCSTYTHCEIHPAMILGICASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGEQEEQFEKPTRQTCQG
MRHALYDKLDDDGIISPGVRVSGDDVVIGKTMTLPENEDELEGTTKRYTKRDASTFLRNS
ETGVVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFFGPTYYQRLKHMVDDKIHSRARGPLQILVRQPSEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVI |
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| NT seq |
3528 nt +upstreamnt +downstreamnt
atgtatgacgaagaagaagatgtgtatgatgagggtgcaggcgaagaaatcagttccgag
ttgtggcaagaagcctgttggattgttatcaacgcttattttgatgaaaaaggtttagta
cgacaacaattggacagttttgatgaatttattcaaatgtctgttcaaagaattgttgaa
gattcaccacaaattgaattgcaagcagaagctcaacataccagcggagaaatggagaat
cctccacgatatttattaaaattcgaacaaatctatttatcgaaaccgacacattgggaa
aaagatggtgcaccttcacctatgatgccaaatgaagcgcgtttaagaaatttaacatat
tcagcgcctttgtacgtggacattaccaaaactattgtcaaagaaggcgaagaaccgatc
gttacgcaacatcaaaaaacttttattggtaaaattcctataatgttacgatcgagtttt
tgcttgttaagtaaattaacggatcgtgatttaactgaattgaatgaatgtccgttggat
ccaggcggttattttattattaatggttctgaaaaagtattaattgcacaagaaaaaatg
gctacaaatacagtttatgtgttttcaatgaaagatggaaaatatgcttttaaatcagaa
attcgatcttgtttggaacatagttcaagacccacgtccacattgtgggtgaacatgatg
gcacgtggtggtcaatcgataaagaaagccgctattggtcaacgtataattgcaattttg
ccatacatcaaacaggaaattcctataatgattgtattccgagcgttgggttttgtagct
gatcgtgatatactcgaacatatcatttatgattttgacgatcccgaaatgatggaaatg
gttaaaccgtctttagatgaagcgttcgtaatacaagagcaaaatgttgcgttaaatttt
attggggcgagaggtgcaagacctggtgttacaaaagaaaaacgtattaaatatgcaaga
gaaattttacaaaaggaaatgttaccacatgttggtgtttctgatttttgtgagactaaa
aaggcatatttcttaggttatatggttcatcgattattattggcagcgttgggtcgtcga
gaattagatgatcgggatcattatggcaacaaacgtttagatttggctggacctctatta
gcttttctatttcgtggtttatttaaaaatttaatgaaagaagttcgaatgtacgcacag
aagtttatcgatcgtggcaaagatttcaatcttgatttagcaatcaaaacaaaaatgata
actgatggattacggtattcattggctactggaaattggggcgatcaaaagaaagctcat
caagctcgtgctggtgtatctcaagtattgaatcgtttaacatttgcatcaactctatca
catttacgacgtgttaattcaccaattggccgtgatggtaaattagccaagccacgtcaa
ttacataacacgttgtggggtatgatatgtccagctgaaacaccggaaggtgctgctgta
ggtcttgtaaaaaatttagctttaatggcttatatttctgttggttcacaaccgtcacca
attcttgagttcttggaagaatggtctatggaaaatcttgaagaaattgcaccatctgca
attgctgatgctacgaaaatttttgtaaatggatgttgggttggcattcatagagatccc
gaacaattaatggcaacgttacgtaaattacgacgtcaaatggacattatcgtatctgaa
gtatcaatgattcgtgatattcgtgacagagagattcgtatctacacagatgctggacga
atatctagaccgctgatcattgtggagaatggaagtctattgttgaagaagtcacacatt
gacatgttaaaagatcgtgaatacaacaattatggatggcaaggattagttggatctggt
gtagtcgaatatatcgatacgttagaagaggaaactactatgatcgctatttcaccggat
gatctacgaaattcaaaggagtacgcgtattgtagtacttatacgcattgtgaaattcat
ccagctatgattcttggaatttgtgcatcaattataccattccctgatcataaccaaagt
cctaggaatacttatcaaagtgctatgggtaaacaagctatgggtgtatatatcacaaat
ttccacgtacggatggacacgttggctcacgtactatattatccacataaaccactggta
acaacaagatccatggaatatttacggttcagagagttaccagctggaattaatagtatt
gtagcaattttatgttacactggatacaatcaagaagattctgttattttgaatgcatct
gctgtggagcgaggatttttcagatcagtattttaccgttcatataaagattccgaatca
aaacgaatcggtgaacaagaagaacaatttgagaaaccaacacgacaaacatgtcaaggc
atgcgtcatgcattgtacgataaactagacgatgatggtatcatttcaccaggtgttcgt
gtatccggtgatgatgtggttattggtaaaacaatgacattacctgagaatgaagatgaa
ctggaaggaacaacaaaacgttatacaaaacgtgatgcgtcaacattcttacgtaatagt
gaaacaggggttgtagatcaagtcatgttgaccttgaattctgaaggttataagttttgt
aagattcgtgtacgatcggtgcgtataccacaaattggtgataagtttgcatcaaggcat
ggacaaaaaggaacgtgtggaattcagtataggcaagaggatatgccgtttacatgcgaa
ggtttaacaccggatattataattaatcctcacgctatcccatctcgtatgacaattggc
catttaattgaatgtattcaagggaaagtatcatcgaataaaggggaaattggtgatgct
acaccttttaacgatgccgtcaacgtacaaaaaatctcaactttattacaagaatacggt
tatcaattacgaggtaacgaagtcatgtacaatggacacactggtcgtaaaattaatgcc
caagtattctttggaccaacctattatcaacgtttgaagcacatggtggatgataaaatc
cattcaagagcacgtggacctcttcagattttagtacgtcaaccgagtgaaggtcgtgcc
cgtgatggtggtctacgtttcggtgaaatggaacgagattgtcaaatttctcatggtgcg
gctcaattccttcgagaacgtttatttgaagtatctgatccgtatcgaatacatgtttgt
aatttttgtggtttgattgccattgcaaatttacgaaataatacatttgagtgtaaagga
tgcaaaaataaaacacaaatcagtcaagtacgattaccatatgcagccaaattattgttt
caagaactgatgtcaatgaatattgctccgagattaatggtcatttaa |
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