Chrysoperla carnea: 123296838
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Entry
123296838 CDS
T09255
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03018
RNA degradation
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123296838
09123 Folding, sorting and degradation
03018 RNA degradation
123296838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123296838
03041 Spliceosome [BR:
ccrn03041
]
123296838
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123296838
mRNA degradation factors
5'-3' decay
Lsm complex
123296838
Spliceosome [BR:
ccrn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123296838
Complex C
U2 snRNP components
123296838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
123296838
NCBI-ProteinID:
XP_044734447
LinkDB
All DBs
Position
3:92970933..92971932
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEATVATR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttattcgtttttcaagtcgttagttgggaaagatgttgtagttgaattgaaa
aatgatttaagtatttgtggtactttacattccgttgatcaatatttaaacatcaagttg
acggacatcagtgttacagatcctgataaatatcctcatatgttgtccgtgaagaattgt
tttattcgtggatcggttgtccgatatgttcagttgcctggtgatgaggttgatactcag
ctattacaggatgccgctagaaaagaagctacggtggcaacaagataa
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