Chrysoperla carnea: 123297435
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Entry
123297435 CDS
T09255
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123297435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123297435
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123297435
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123297435
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123297435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_4
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
123297435
NCBI-ProteinID:
XP_044735029
LinkDB
All DBs
Position
4:74813073..74815122
Genome browser
AA seq
343 aa
AA seq
DB search
MELIVANVDHIKFDIEVALDEQYGALPLPFPGMDKSTAAVCDFYTSAAGCQKGQSCPFRH
VRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYIAGFCPDGPQCKYMHPQFDLPAAPDANA
KDSKKPQVIICHYCGEIGHKISYCLKMTPEAREAAVKQEEAKLKALGYMKPPQGPPFGIP
GAANGQNSENNEEMNEQQFDHPQDNPRQHNQHNQHNHHHNNQSQQNNSNNMGGNHPRMPP
KPLEEVTCFKCGNKGHYANRCPKGHLAFLSQAKSNSQNLNNNR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacttatagtagcgaatgttgatcatattaaatttgatattgaagttgcattagac
gaacaatatggagctctacctcttccattccctggaatggataaatcaacagcggctgtt
tgtgacttttatacatcagcagccggttgtcagaaaggacaatcgtgtccttttcggcat
gttcgaggcgatcgtacaattgtttgtaaacattggctacgtggattgtgtaaaaaaggc
gatcaatgtgaatttttacatgaatatgatatgactaaaatgccggaatgttatttttat
tcgcgttttaatgcgtgccacaataaagaatgtccatttttacatattgatccggaaagt
aaaattaaagattgtccatggtatgatcgtggattttgtcgacatggtccacattgcaga
catcgacatgtccgtcgtgtactttgcatgaactacatcgctggattctgtcctgacggt
ccacaatgtaaatacatgcatccacaatttgatctacccgcagcacccgatgcgaacgca
aaagatagtaaaaaaccacaagtgattatttgccactattgtggagaaatcggtcataaa
atctcgtattgcctaaaaatgaccccagaagcacgtgaagctgctgttaaacaagaagaa
gctaaattaaaagcattaggctacatgaaacctccacaaggacctccattcggtataccg
ggtgctgcaaatggccagaattcggagaataatgaggaaatgaacgaacaacagtttgat
catcctcaagataatcctcggcagcataatcaacataaccagcataatcatcatcataat
aatcagtcacaacagaataatagcaataatatgggtggtaatcatccacgaatgccaccc
aaaccgttggaagaagtcacatgttttaagtgtggtaataaaggacattacgcgaatcgt
tgtccgaaaggacatttagcattcttatcacaagctaaaagtaattcacagaatttaaat
aacaatagataa
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