Chrysoperla carnea: 123297544
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Entry
123297544 CDS
T09255
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03013
Nucleocytoplasmic transport
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123297544
09122 Translation
03013 Nucleocytoplasmic transport
123297544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123297544
03041 Spliceosome [BR:
ccrn03041
]
123297544
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123297544
Spliceosome [BR:
ccrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123297544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
123297544
NCBI-ProteinID:
XP_044735182
LinkDB
All DBs
Position
4:29994249..29998177
Genome browser
AA seq
699 aa
AA seq
DB search
MVKVNEEANSKRRKKTTSETTKPEEDIYRVKLKTIPLSYTEQVVTYEKNEALNRSADKDA
NLYCRTCENIREILSEIEELKNLPDGEDKTNQIAEKRIQVSLQFVLLKKLNRYEKIRTKA
SRDALHKEKQRVDSTQLHLHNLLYELEYLKKEISKCLQFKSKDEEIELVPEEDFYKEAPE
SISRPSVTKKDEHQLRLARLEWELRQRKQLSESCHKLEVGKTQAATEIVNKQERLDGLAP
RLNQILEVTKPLKDYFGISSDKIQEQNNLAYLLPDPLFLLYFQVDAYQKVYDKTVSVCIK
GDEDDARQLKSETPDEASDSDSDPELEESNGRNKRRHRKASRSDRHEEKRKKLLAKHPLS
VEIVFQSSIKAHNSDDLIKLQITFYWLTHLHIVTTKCEIIPGVAGGVTSGDVLSKNTILT
ELFESDTGEDSPNIANHYQLRQVGLGTFPTLIDELGIPYNWTQKICGLDFLSAREGTLPT
ANKELSQSSVEVVLKVIQNRFKARLALSKQIQAFEQCNLSSLAEISHAYEYPDNVQSKLE
LWKRINWTDFIKIPASKPFVENQIFSSNDMIYKLIASRNSTKLIAYVSIKHNYPEQKPIF
CVSVHWNEEWNTGNCEAIRDMEKVVNVEWPEKTPKKLSPKETFILGAQIHRLLACFDIFL
ETLPTNDFPQHKIFFKPIRGRNRSRPYKYLKVGGGIFTQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagtgaacgaagaggcgaattcgaaacgtcgtaagaagaccacaagtgaaaca
acaaaacctgaagaagatatttatcgggtaaaactgaaaaccataccattatcatataca
gagcaagttgtaacgtatgaaaaaaatgaagctttaaatcgatcagcagataaagatgcg
aatttgtactgtcgaacatgtgaaaacattcgagaaattttatccgaaatagaagagttg
aaaaatttacctgatggtgaagataaaacaaatcaaattgcagaaaaacgtattcaagta
tccttacaatttgtactgttgaaaaaattaaatagatacgaaaaaattcgtacaaaagct
agcagagatgctttacataaagagaaacaacgcgtcgacagtacacaattacatttgcat
aatttgctttatgaattggaatatttgaaaaaagaaatttcaaaatgtcttcaattcaag
tctaaagatgaagaaatcgaactcgtaccggaagaagatttctataaagaagcaccagag
agtatatctcgcccgtctgtaacgaaaaaagacgaacatcaattacgattagcacgatta
gaatgggagctaagacaaagaaaacaattgtcagaatcgtgtcacaaacttgaagttgga
aaaactcaagcagctacagaaatagttaacaaacaagagcgtctcgatggccttgcacca
cgtctcaatcaaatattagaagttacgaaaccattaaaagattattttggtatatcatcg
gacaaaatacaagagcaaaataatctggcatatttattaccagatcctctgttcttattg
tattttcaggtcgatgcatatcagaaagtatatgataaaacagtatcagtgtgtattaaa
ggcgatgaagatgatgctcgtcaattaaaaagtgaaacacctgatgaggcttctgattca
gattcggatcctgagctagaagaaagtaatggtcgtaataaacgtcgtcatcgtaaagct
tcccgatctgatcgtcatgaggaaaaacgtaaaaaattattagcgaaacatccattgagt
gttgaaatagtctttcaaagttcaatcaaagctcacaattccgatgatttaattaaactt
caaatcacattttattggttaacacatttacatattgttacgactaaatgtgaaattatt
ccaggagtagctggaggagttacatccggggatgttttatccaaaaatacaattcttaca
gaattgtttgaatcagacacgggtgaagacagcccaaatattgcaaatcattatcaatta
cgtcaagtgggtcttggtacattcccaactttaattgatgagctcggtattccatataat
tggacacaaaaaatatgtggattagatttcttgtcagcacgcgagggtactcttccaacg
gcgaataaagaattaagtcaatcaagtgttgaagttgtgctgaaagttatacagaataga
ttcaaagcacgattagctttatcgaaacagatacaagcttttgagcaatgtaatttatct
agtctagctgaaatatctcatgcatacgaatatccagataatgtacaatcgaaattagaa
ttatggaaacgtattaattggactgattttatcaaaattccagcatcaaaaccattcgta
gaaaatcaaattttttcatctaatgatatgatttacaaacttattgcttcgcgaaattca
accaaacttattgcctatgtttccataaaacataattatccagaacaaaaaccaatattt
tgtgtatctgttcattggaacgaagaatggaatactggaaattgtgaagctattcgggac
atggaaaaagttgtaaatgttgagtggcctgagaaaactccaaaaaaattaagtccaaaa
gaaacttttattttaggtgctcaaattcatcgattattagcctgttttgatattttctta
gagacgttaccaacaaatgattttcctcaacataaaatatttttcaaaccgattcgggga
agaaatcgtagtcgtccatataaatatctaaaagtaggaggtggaatttttactcaataa
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integrated database retrieval system
