Chrysoperla carnea: 123297612
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Entry
123297612 CDS
T09255
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03430
Mismatch repair
ccrn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123297612
03460 Fanconi anemia pathway
123297612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123297612
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123297612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
123297612
NCBI-ProteinID:
XP_044735289
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All DBs
Position
4:1725457..1731512
Genome browser
AA seq
889 aa
AA seq
DB search
MEIVEPVISTTDKAKEIKAIDRSSVHKICSGQVVLTLAVAVKELLENAIDAGATTVEIRL
KNNGCDLIEVIDNGQGVEEHNFQALTLKHHTSKIQDFNDLISVTTFGFRGEALSSLCALS
KLSVTTRHKSAECAYKILYDTNGKIMSKTRCARSIGTTVVLENLFSTLSVRHKEFQRNIK
REYTKMCNLLYAYCLIATGVKIVCTNTTNKNMKSIIVSTQENNTVKDNISCIFGHEQFSS
IIEFEQIEPTPEVCTEYNIKDENVQIPFTIIGFISYCKPGSGRGTSDRQFYYINSRPCEI
NKLTRLVNDVYHQFNNSQYPFVLLNIKVNTSMVDVNVTPDKRKLFMENENLLLATIKSSL
LNMFRKNITCFDTSNLNIKDDGIKRGIKRNNQEESQMSMKSFVMRTLLQKRMKIDDDKVE
NLSEISSDEEIEVKEKKKTTIQDDLSKNVIEISGCDVKLEKIKERIVPVEKASEKNIKIE
FPACTSHSLIEKENLIDTGKIDKIEQTQKLTTDPTITVQEIKTNSIVKKESTLSNLEKDE
QEVIHESDSNSLHEEEEEEEEEPHKPDSTDAKDSYKIIEFSQSNNKIIDDMNLEDCSPND
IDTEQKELENQNNENQSKIENKINEDETEDLQYDCTQIPTRDKISANITLKDLKNRLLEK
QKCQQKSNEVNIKFRAEINPLSNQNAEKELEREIKKDTFKKMDIIGQFNMGFIIAKLEND
LFIIDQHATDEKYNYEILQETTIMQRQKLVVPQKLELTTANKALIVDNMEIFNKNGFMFN
IEDSENTQNIYLTEVPLSKNFCMGKDDIDDLLFMLQDGSQQMCRPTRIRSMLALRACRKS
VMVGDPLSKQDMRKLIDHMGEIDHPWNCPHGRPTMRHLVNLSLMNCEDS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgttgaacctgtaatttctacgacagataaagcaaaagaaatcaaagcaatt
gatcgaagttctgtgcataaaatatgttctggccaagtggttttaactttagctgttgct
gttaaagaattgttagaaaatgcaattgatgcgggtgctacaacagtagaaattcgatta
aaaaataatggctgcgatttaattgaagttatcgataacggacaaggtgttgaagaacat
aattttcaagctttaactttaaaacatcatacatccaaaatacaagattttaacgattta
attagtgtgacaacatttggattccgtggtgaagctttaagttcattatgtgcgctttca
aagttatcagttacaacgagacataaatcagctgaatgtgcgtataaaattttgtatgat
acaaatggtaaaatcatgagtaaaacaagatgtgctcgttcaattggaactacagtcgta
ttagaaaatttattttcaactctttctgtacgccataaagaatttcagaggaatattaaa
cgtgaatacactaaaatgtgtaatttactatatgcatattgtttaatagccacgggcgtt
aagattgtatgcacaaatacgacaaataaaaatatgaaatcaatcatagtttcaacacaa
gaaaataataccgttaaagataatatttcatgtatttttggacacgaacaatttagttca
attatagaatttgaacaaattgaaccaacaccggaagtatgcactgaatataatattaaa
gatgaaaatgttcaaataccctttacaattatcggtttcatttcatattgtaaaccagga
tctggacgtggtacaagtgatcgacaattttattatattaattcacgaccatgcgaaatc
aacaaattaactcgattagttaacgatgtttatcatcaatttaacaattcacaatatcca
tttgtattattgaacataaaagtgaacacttcaatggtagatgttaatgtgacaccggat
aaacgaaaactatttatggaaaatgaaaatcttttattagcaactattaaaagtagttta
ttgaatatgtttagaaagaatataacatgctttgatacaagtaaccttaatattaaggat
gatggaatcaaacgtggaattaaacgtaataatcaagaggaatcacaaatgtccatgaaa
tcatttgtaatgcgaacattgttacagaaacgaatgaaaattgatgatgataaggttgaa
aatttaagtgaaattagtagtgatgaagaaattgaagtgaaagagaagaaaaaaactaca
attcaagatgatttatcgaaaaatgttattgaaatttcaggatgtgacgttaaattagaa
aaaataaaagaacgaattgtaccagttgaaaaagcaagcgaaaaaaatattaaaattgaa
ttccctgcttgtacatcacattcactcatcgaaaaagaaaacttgattgacacaggaaaa
atagataaaatcgaacaaacacaaaaattaacaacagatccaacgataactgtacaagaa
attaaaactaattcgattgttaaaaaagaatcgacattaagcaacttagaaaaagatgaa
caagaagtaattcacgaatctgattcaaacagtttacatgaagaggaagaagaagaagaa
gaagaacctcataaacctgattcaacagacgcaaaagattcatataaaattattgaattc
agtcaaagtaataataaaataattgatgacatgaatttggaagattgcagcccgaacgac
attgacacagaacaaaaagaattagaaaaccaaaataatgaaaatcaatcaaaaattgaa
aataaaatcaatgaagatgaaactgaagatttacagtacgactgcacccaaataccaacc
agagataaaatatccgcgaatatcactttgaaagatttaaaaaatcgattattagaaaaa
caaaagtgtcaacaaaaatcgaatgaagtaaacattaaatttcgtgctgaaataaatcca
ctatcaaatcaaaatgctgaaaaggaattagaacgtgaaataaaaaaggatacatttaaa
aaaatggacataattggacaatttaacatgggctttataattgctaaattagagaatgat
ttatttataattgatcagcacgctaccgatgaaaaatataactatgaaattttacaagaa
accacaatcatgcaacgacaaaaattagttgtaccacaaaaattggaattaacaacggct
aataaagctttaattgtggacaatatggaaatatttaataaaaatggatttatgtttaat
attgaagattctgaaaatacccaaaatatttatttgacagaagtaccattaagtaaaaat
ttttgtatgggaaaagatgatatcgatgatttactttttatgttgcaagatggaagtcaa
caaatgtgtcgtccaactagaattcgatcaatgcttgcattaagagcatgtcgaaagtct
gttatggttggtgatcctttatcgaaacaagatatgagaaagcttattgatcatatgggc
gaaattgatcatccttggaactgccctcatggaagaccaacaatgagacacctggtgaat
ttatcattaatgaactgcgaagattcctaa
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