Chrysoperla carnea: 123298217
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Entry
123298217 CDS
T09255
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123298217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrn03021
]
123298217
03041 Spliceosome [BR:
ccrn03041
]
123298217
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123298217
Transcription machinery [BR:
ccrn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123298217
Spliceosome [BR:
ccrn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123298217
Complex B
123298217
Complex C
U2 SnRNP specific factors
123298217
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
123298217
TFTC complex
123298217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Motif
Other DBs
NCBI-GeneID:
123298217
NCBI-ProteinID:
XP_044736101
LinkDB
All DBs
Position
4:complement(25518492..25527581)
Genome browser
AA seq
1220 aa
AA seq
DB search
MYLYNLTLQRATGITHAIHGNFSGTKTQELLISRGKSLELLRPDANTGKVHTLLAIEIFG
VIRSLMPVRLTGGTKDYIVVGSDSGRIVILEYHPAKNQFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAIMIGAIEKQKLVYILNRDELIRLTISSPLEAHKSNTLVTHMVGVDNGFNNP
MFACLEIDYEEADSDPTGEAAQKTQQILSFYELDVGLNHVVRTYSEPLEEHTNFLISVPG
DKDGPSGVLICSENYLTYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLEVQKEIVTEIKLKYFDTVPVASAMCVMKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAIPLEEGDTFFFAPRPLRNLVLIDEMESLSPILACQVADLANEDT
PQLYALCGRGPRSSLRVLRHGLEVTEMAVSELPGNPNAVWTVKRRIDEKYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTELTLCCASLAEDALVQVYPGGVRHINAARRVNDWKAPG
KKSIVRCAVNQRQVVIAFAGGELVYFEMNVAGFLGEYDEHKSMEAEVLCMALGTVEPGKQ
RSNFLAVGLSNSTVKIISLDPADCLAPRSSQYLPVVPESLCIVEMGCSDHDNNKDDLPGS
TSSLYLYVGLSNGALSRTVLDPVLGELKDPRTRYLGTRPVKLFRIKMQDSEAVLAISSRS
WLSYYYQNRFYLTPLSYETLEYASGFSSEQCPEGIVAISSNTLRILALEKLGAVFNQVSF
PLEYTPRKFVIHPKSNNLIIIETEHNAYTDDTKKQRRIQMAEEMCEAAGENEQELAKEMA
QAFLNEDLPENIFSAPKAGHGMWASLIRVMDSKQGNSLLIHRLEQNEAAISLCFVRFHNQ
PESNLYLIVGVAKDMQLNPRVATIGFLDTYLVSNGGATLELVHRTSCNEVPGALCAHQGR
LLASVGKVLRLYDLGKKKLLRKCENKHIPYHIVNIQAMGQRIYVADVQESIYMIRYRRRE
NQLIIFADDTVPRWVTTTTILDYDTMAIADKFANITIVRLASDVSDDVDEDPTGNKALWD
RGLLNGASQKADTVASFHVGEIVTSLQKATLIPGGSEALVYCTVSGAVGAFVPFSSREDH
DFFQHLEMHMRSENSPLCGRDHISYRSYYYPVKNVIDGDLCEQFNSLDLAKQKSIAEDLD
RRTPAEVSKKLEDIRTRYAF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaatttaacgttgcaacgggctaccggcattactcatgccattcacggt
aatttttcgggtacgaaaacacaagagcttttaatctcacgtggaaaaagtcttgaatta
ttacggcccgatgcaaataccggtaaagttcatactttattggcgattgaaatatttggt
gttattcgatcgttgatgcctgtacgattgacgggaggaaccaaagattatattgttgtt
ggatcggattcagggcgtattgttatcttggaatatcacccagccaaaaatcaattcgaa
aaagttcatcaagaaacattcggtaaatcaggatgtcgtcgaatagttcccggtcaatat
ttggccatagatccaaaagggcgtgcaatcatgattggtgcaatcgaaaaacaaaaattg
gtgtatattttgaacagagacgaactaattcggttgaccatttcatcacccctcgaggcc
cacaaatctaacactttagtaactcacatggttggtgtggacaatggttttaacaatcca
atgttcgcatgtttggaaatcgactacgaagaagctgactcagatccaacgggtgaagca
gcgcaaaaaactcaacagattttaagcttctacgaattggatgttggtttaaatcacgtg
gtccgaacgtactcagaaccacttgaagaacacactaattttttaatatcagtacctgga
gataaagatggtccaagtggagtattaatttgctcggagaactacttaacatataaaaat
cttggtgatcaacccgatattcgatgtcctattccacgtcgacgaaacgatttggatgac
ccagaacgtggtatgatatttgtatgctcggctacgcataaaacaaagtcaatgttcttt
ttcttggctcaaaccgaacaaggcgatatctttaagatcacgttagaagtacaaaaggag
attgtcacggaaattaaattgaaatattttgacacggttccggttgcgtcggctatgtgt
gtcatgaaaacagggttcttgtttgttgcatctgaatttggaaatcattatctttatcag
attgctcatttgggtgatgatgatgatgaacctgaatttagttcagccattccacttgaa
gaaggtgatacgttcttctttgctccacgtccactacgaaatttggttttaattgatgaa
atggaatcgttgtctcctattttggcatgccaggttgctgatttagccaatgaagataca
ccacaactctatgcattatgtggtagaggacccaggtcatcgttacgtgtattacgtcac
ggtcttgaagtaactgaaatggctgtatcagaacttcccggaaatccaaatgcagtatgg
actgtaaaacgcagaattgatgaaaaatacgatgcatatattatcgtatcttttgtaaat
gctactctagtactttcaattggtgaaactgttgaagaagtcactgatagtggttttttg
ggtacggaattaacattgtgttgtgcatcactcgccgaagatgcattagttcaggtttat
ccaggcggtgtacgacatatcaatgccgcacgtcgtgtaaatgattggaaagcaccgggg
aaaaaatcgattgtacgttgtgctgtgaatcaacgacaggttgttattgcatttgctggt
ggcgaacttgtttacttcgaaatgaatgtggcaggatttttgggggaatatgatgagcat
aaatcaatggaagcggaagttttatgtatggcccttggcacagtcgagccaggaaaacaa
cgatcaaatttcttagctgtaggtctctcaaatagcactgtgaaaattatatctttagat
ccagctgattgtttagcaccaagatcttctcaatatcttcctgtagtacctgaatctcta
tgtatcgttgaaatgggttgctctgatcacgataacaacaaagatgatcttcctggatcc
acatcgtcgctatatttatacgtgggtctatcaaatggagctttatcacggactgtgctt
gatccagtcttgggtgaattgaaggatccaagaacacgatatttgggaacacgtccagtt
aaattattccgtattaaaatgcaagattctgaagcggttttagccatatctagtcgttca
tggctgtcatattactaccaaaatcgtttttacttgacacctttatcgtatgaaacacta
gaatatgcaagcggtttctcatcggaacaatgtcctgaaggtattgttgcaatttcatcg
aatacattacgaattcttgccctggaaaaattgggtgccgtgtttaaccaagtatcattt
ccattggagtataccccacgaaagtttgtgatacatccaaaatcaaataatctaataatt
attgaaactgaacataatgcgtacacggacgatacaaaaaaacaacgacgaattcaaatg
gctgaagagatgtgtgaagctgcgggtgaaaatgaacaagaattagcaaaagaaatggca
caagcatttttaaatgaagatctaccagaaaatatattttcagcaccaaaagctggacat
ggaatgtgggcatcgttaatacgtgttatggattcaaaacaaggcaatagtttattaatt
catcgtttggaacagaatgaagctgcgatttcgttatgttttgtacgatttcataatcaa
cctgaaagtaatttatatttaattgttggtgttgctaaagatatgcagttgaatccacgt
gtcgcaactattggatttttggatacatatttagtatcaaatggtggagctacccttgaa
cttgtacatcgaacatcatgtaatgaagtaccaggtgcattatgtgcacatcaaggacga
ttattagcttcggttggcaaagtattgagattgtatgatttagggaagaaaaaacttcta
cgaaaatgtgaaaataagcacattccatatcacatcgtcaacattcaagcaatgggtcaa
cgtatctacgtggccgatgttcaagaatcaatttatatgatacgctatcgacgccgtgaa
aatcaattaattatattcgctgatgatactgtaccacgatgggttacaacgacaacaatc
ttggattacgatacaatggcaatagctgataaatttgcgaatattacaattgtacgtttg
gctagtgacgtttccgatgatgttgatgaagatccaactggcaataaagcattatgggat
cgaggtttattaaatggcgcatcacaaaaagcggacaccgttgccagttttcatgttggt
gaaatagtcacatcactacaaaaagcaactttaattcccggtggctctgaagcactagta
tattgtaccgttagtggtgctgtaggggcatttgtaccattttcatcacgtgaagatcat
gatttctttcaacatttagagatgcacatgcgtagtgagaattcaccattatgtggacgt
gatcatatctcatacagaagttattattatccagttaagaatgtgatcgatggtgattta
tgtgaacaattcaattcattagatttagctaaacagaaaagtattgctgaagatttagat
cgacgaacaccggctgaagtttccaagaagttggaagatatccgtaccagatatgcattt
taa
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integrated database retrieval system
