Chrysoperla carnea: 123298223
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Entry
123298223 CDS
T09255
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123298223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123298223
03009 Ribosome biogenesis [BR:
ccrn03009
]
123298223
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123298223
Spliceosome [BR:
ccrn03041
]
Complex A
U1 snRNP components
U1 related factors
123298223
Complex B
123298223
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
123298223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123298223
NCBI-ProteinID:
XP_044736109
LinkDB
All DBs
Position
4:25509469..25516815
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AA seq
597 aa
AA seq
DB search
MYSDSRRGGGMSRGYGNGQNGGSNNRSFNNYNRGRGMNNGRNNRGGGNSFRGRSNYGKPN
DYVAKNVNGGTLKTKQWDMSALQPFKKNFYFPNASNRRSAEDIQTFRDSQEITLKGSNIP
NPIQYFDEGNFPAYVLQGLSKMGYSVPTTIQAQGWPIALSGGNLVGIAQTGSGKTLAYIL
PAMVHINNQPPLEPGDGPIALVLAPTRELAQQIQQVANDFGKFASINNACIFGGAPKEGQ
SRDLARGVEIIIATPGRLIDFLERGTVNLARCTYLVLDEADRMLDMGFEPQIRKIIQQIR
PDRQVLMWSATWPKEVKALAEDFLHEYTQLNIGSLGLSANHNILQIVDVCKEHEKDMKLR
RLLEEISSEKENKTIIFAKTKRKCEEIVQNVTNDGWSAAALHGDKNQNEREYVLAEFRSG
RIIILVATDIAARGLDVDDVKFVINYDFPQSSEDYIHRIGRTGRSERTGTAYAFFTSSNA
RHANALISVLREANQEVSPKLIEIADSLKNEYGNRGKFRNNRGGANDGSALPTRFGKISS
GGKNMRGNVSNNGGNRYINNGGSNTNMRSVPTTHKYNSQVPPPQYNMYDAYDAQDQY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagattcacgacgtggtggaggtatgtctcgtggatatggaaatggtcaaaat
ggtggatcaaataaccgatcattcaataattataatcgtggacgaggaatgaataatgga
cgtaacaatcgcggcggtggaaattcatttcgaggtcgctctaactatggaaaacctaat
gattatgtggcaaaaaatgttaatggtggaaccttgaaaactaaacaatgggatatgtct
gcgttgcaaccatttaaaaagaatttttattttccaaatgcatcgaatcgtcgcagtgct
gaagatattcaaactttccgagattctcaagaaattacactcaagggctctaacatccca
aaccctatacaatattttgacgagggaaattttcctgcatatgttttacaaggtctttca
aaaatgggttattcagtaccgacgactattcaagctcaaggttggccaattgctctaagt
ggtggaaatcttgttggaattgcccaaacgggctcaggaaaaacgcttgcctatatatta
ccggctatggtgcatattaacaaccaacctccgttagaacctggcgatggtccaattgca
ttagttcttgcaccaacacgagagcttgctcaacaaatccaacaagttgcaaatgatttc
ggcaaatttgcgtccattaataacgcatgcatatttggtggtgccccaaaagagggacaa
agcagagatcttgcacgcggtgttgaaattataatcgcaacaccaggtcgattgattgac
tttttggaacgtggtacagtaaatttggcacgctgtacatatcttgtacttgatgaagct
gatcgaatgttagatatgggatttgagccacaaatccgtaaaattattcaacaaatccga
ccagatagacaagttcttatgtggtcagctacgtggcccaaagaggtgaaagctttggct
gaagactttttgcatgagtatactcaattaaatattggatcgttaggattgagtgctaat
cataacattttacaaattgtggatgtttgtaaggagcatgaaaaagatatgaaattgcgt
cgtttgttagaagaaatatcgtccgaaaaagagaacaagactattatttttgcgaaaact
aaacgaaaatgtgaagaaattgtccaaaatgttactaacgatggttggtctgcagcggcg
ttacatggtgataaaaatcaaaatgagcgtgaatatgtattggctgaatttcgttcagga
cgtattataatattggttgctactgatattgcagctcgtggacttgatgttgacgatgtt
aaattcgttattaattacgattttccacaatcgtcagaagattatattcacagaattgga
agaactggacgttcagagcgtaccggtactgcgtatgcattttttacatcatcaaatgca
cgtcatgcaaacgcgttaatatccgtattacgtgaagcgaatcaagaagtcagccctaaa
ttaattgaaattgctgattcattgaaaaatgaatatggtaatcgtggaaaatttcgtaat
aatcgtggtggagcaaatgatggaagtgctttaccaacgagatttggtaaaatatcttca
ggtggaaaaaatatgcggggaaacgtatcaaataatggtgggaatcgttatataaataat
gggggctcgaatacaaacatgagatcggttcctactacccataaatataattcgcaagtt
cccccaccacaatataatatgtacgatgcttatgatgcacaagatcagtattaa
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