Chrysoperla carnea: 123298450
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Entry
123298450 CDS
T09255
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123298450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123298450
03009 Ribosome biogenesis [BR:
ccrn03009
]
123298450
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123298450
Spliceosome [BR:
ccrn03041
]
Complex A
U1 snRNP components
U1 related factors
123298450
Complex B
123298450
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
123298450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123298450
NCBI-ProteinID:
XP_044736385
LinkDB
All DBs
Position
4:complement(33440067..33449222)
Genome browser
AA seq
579 aa
AA seq
DB search
MAFENRTNGSYGTRNNYGGNRGGFGSSNRNGSNSSFGNGGSKFSNGSGKFGGKSGSDGKF
GGRRDNGNSRFGNSNGGGFRNSNNASGGAPGRALRKPDWESHKLRPFKKDFYVPHPSVLS
RTKNEVEKYRDTAQITINGDAPPPITHFEEGNFPEYVMEGIRKQGYDVPTAIQAQGWPIA
MSGKNMVGIAQTGSGKTLAYILPAIVHINNQQPISRGEGPIALVLAPTRELAQQIQSVAT
EFGSTTYVRNTCIFGGAPKGPQARDLERGVEIVIATPGRLIDFLEKGTTNLARCTYLVLD
EADRMLDMGFEPQIRKIIEQIRPDRQTCMWSATWPKEVRKLAADFLNDYVQINIGSLQLA
ANHNILQIVDVCQEAEKEAKLANLLQEIGNSDEEAKIIIFVETKKKVENITRTIRKFGWP
AVCMHGDKSQQERDYVLREFRNGNASILIATDVAARGLDVEGIKYVINYDYPNSSEDYIH
RIGRTARSQSTGTSYAFFTPSNARQAKDLISVLIEANQTINPKLKELAQRTGGFGGNKGG
RWGYGGGYGRREQTNGGGAQHRRFDNQKSYGGNYKKKEY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaaaaccggacaaatgggtcatatggtacccgaaataattatggaggcaac
cgaggaggttttggaagtagcaatcgcaacggttctaattccagttttggaaatggtggt
agcaagttttcaaacggaagtggaaaatttggtggaaaatccggtagcgatggaaagttt
ggaggtagaagggataatggaaatagtcgatttggtaattcaaatggtgggggcttcaga
aattcaaacaacgcaagcggtggagcacctggacgagcattacgtaaaccagattgggaa
tcacacaagttgagaccattcaaaaaagatttttatgttccacacccatcagtattgagt
cgcactaagaatgaagttgaaaaatatcgtgatactgcacaaattaccatcaatggagat
gccccaccaccaataacccatttcgaggaaggaaatttccccgaatacgttatggaaggt
attcgtaaacaaggttacgatgtaccaactgccattcaagctcaaggatggccaattgcc
atgagtggaaagaacatggttggaattgcccaaacaggatcaggaaaaaccttagcttac
attttaccagctattgttcatatcaataaccaacaacccatttcacgtggagaaggacct
atcgcattagttttggcaccaacccgtgaattggctcaacaaattcaatcggttgctacc
gaatttggaagcactacttatgtcaggaacacatgcattttcggtggtgcaccaaaagga
ccacaggctcgtgacttagaacgaggcgttgaaattgtaattgccacacctggacgttta
attgatttccttgagaaaggcacaacaaatttggcaagatgtacatacttagtattagac
gaagccgacagaatgttagacatgggattcgaacctcaaattagaaaaattatcgaacaa
attcgtccagacagacaaacttgcatgtggtccgctacatggccaaaagaagttagaaaa
ttagctgcagatttcttaaacgactatgtacaaattaacattggatcattacaacttgcc
gcaaatcataatatcttacaaattgtcgacgtatgccaagaagcagaaaaggaagcaaaa
ttagcaaatttattacaagaaattggaaactcagacgaagaagctaaaataatcatattc
gtcgaaacaaagaaaaaagtagaaaatatcacacgaacaatccgtaaattcggttggcca
gcagtttgtatgcacggtgataaaagccagcaagaaagagactatgtattacgtgaattc
agaaatggaaatgcaagtatattaatagcaacagatgtggccgcccgaggattagatgtt
gagggtattaaatatgtcataaattatgactaccctaactcgtcagaagactatattcac
cgaataggaaggacagctagatcacaaagtacaggtacatcatacgcattcttcacacca
tcaaatgccagacaagcaaaagaccttatatcagtgctcatagaagcaaaccaaacgata
aacccaaaactaaaagaacttgcacaaagaaccggtggtttcggtggtaacaagggtggt
cgatggggttatggtgggggttatggacgtagagaacaaacaaatgggggtggagcacaa
cacagacgattcgacaaccaaaaatcatatggcggtaattataaaaagaaagaatattaa
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