Chrysoperla carnea: 123298506
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Entry
123298506 CDS
T09255
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123298506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123298506
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123298506
mRNA degradation factors
5'-3' decay
Decapping complex
123298506
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
123298506
NCBI-ProteinID:
XP_044736469
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Position
4
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AA seq
799 aa
AA seq
DB search
MADSFFGFDTSLSRDEECPGDLEDLDHDEQEYDALNDETFGDDNETSAGPLDDWEAQHEQ
LAEIAESSKKNHTLEESLNKLVDDDLINASSNQNNVDIWANIVKPPDVTQTSTPHTSSRN
KDLSNSASMLIKSLPENHINSVFNQQKNGGLTNGLTLPKNVCTVEELERGLLTNRNNEVP
PKPSFLPNFMPPNHQMQPPPRFPPGLNSMLLNPPYMPPPGLGAQHSPNIFRFVTPHPLLM
QHGVSSSAHNMSTGVPRPSINIRPNMGGIHQKNTLLPNRNFPLPNTNFKNFRPDFHTQSF
QPYNHIRPPFHQENNAAFLQQNAGHQQGQRPGGLNANNRNNNYPQHNNPHQQQMQQQQNQ
RGEPENKDEYAGLMTNREKQWLINIQLLQLNTGTPYFDDFYYTVFVDRQNKLEKENRPTT
KQDQHSKNNRYQNHNRHQNHRKDDYNKDDRNHRDRDNNPTQIHRTYTPLQFENSLGKLQC
GSVTAPRKIIDMDVVSHDKETESNQLSLSMQRDVRKTKQTLLELETLFGLVLRLEDLNNP
LAIANTLKLREIKEKQKIQQLETATVEEKEEILKQLQDDSLVKNDNKEDLLNKIFNGVLN
DDKFSGYVGVRKGKVLLLRLLPHLCKNYADKYLEIWMKLLASIPVAGKKDQLTDNILPQF
FHFFDRFVDQLNMDSILKLTSVLTDIIKEENARLISPEKSSLGLVLCNKFGISCITKLIE
RSETLFATLQVNEAMEQYHQWYHFLSLISKVIQSVELKMDMPMQPLENCVMETHLKRSRI
IAPDQYSIFLNVFCIKHTA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcatttttcgggtttgatacctctttgagtcgtgatgaagaatgtcccggt
gatctagaagatttagatcatgatgaacaagagtatgatgctttaaatgatgagacattt
ggtgatgataatgaaactagtgcaggtccgttggatgattgggaagcacaacatgaacaa
ttggccgaaatagcagaaagttcgaaaaaaaatcacactctagaagaatccttaaataaa
ttagttgatgatgacttaataaatgcatcgtcgaatcaaaataatgtggatatttgggca
aatattgtaaaacctccagatgtgacgcaaacatccacaccacatacaagttctcgaaat
aaagacttgtccaatagtgcgtctatgttaatcaaatctctacccgaaaatcatataaat
tcggttttcaatcaacagaaaaatggaggtttaacaaatggactgactttgccaaaaaac
gtttgtacagttgaagaattagaacgaggtttgctgacaaatcgtaataatgaagtacca
ccaaagccatcatttctgcctaatttcatgccgcctaatcatcaaatgcaacccccaccg
cgatttccacctggattaaattcaatgttattaaatccaccgtatatgccgccgcctggt
ttaggagcacaacattcgccaaatatatttcgttttgtaactccacatccattattaatg
caacatggagtatcatcttccgcacacaatatgtcaaccggtgttccaagacctagtatt
aatattcgaccaaatatgggaggaatacatcaaaaaaatactcttcttccaaatagaaat
tttcctttaccgaatacaaattttaaaaattttcgaccggattttcacacacaaagtttt
caaccatacaatcatatacgaccaccatttcatcaagaaaacaatgctgcattccttcaa
caaaatgcaggccatcaacaaggtcagcgtcctggtggtttgaatgcaaataaccgtaac
aataattatccgcaacataataatccacatcaacaacaaatgcaacagcaacagaatcaa
agaggggaaccagagaataaagatgaatatgctggtttgatgacaaatcgtgaaaaacaa
tggttgattaatatacagctattgcaattaaatacgggcacaccttattttgatgatttc
tattacactgtatttgtggatcgtcaaaataaattagaaaaagaaaacagacctacaaca
aaacaagatcaacattcgaaaaataatcgttatcaaaatcataatcgacatcaaaaccat
cgaaaagatgattataataaagatgatcgaaaccatcgagatcgagataataatccgact
caaatacacagaacatacacgccgctgcagtttgaaaattcattaggaaaattacaatgt
ggctcggtgacagcacctagaaaaataatcgatatggatgtagtatcacacgataaagaa
acagaatcaaatcaattatctttaagcatgcaacgtgatgtacgaaaaaccaaacaaaca
ttactagaattggaaacattatttggccttgtgctacgattagaagatttaaataatcca
ttagccattgccaatacattaaagctaagagaaatcaaagagaaacaaaagatacaacaa
ttagagacagctaccgttgaagagaaggaggaaattttaaaacaattacaagacgattca
ttagttaaaaatgataataaagaagatttattaaataaaatatttaatggtgttttaaat
gatgataaatttagtggttatgttggtgttagaaaaggaaaggtattgttattacgactt
ttgccgcatttatgcaagaattacgctgataagtatttagaaatatggatgaaattactg
gcatcaattccagttgctggtaaaaaagatcaacttacagataatattcttccccaattt
tttcatttttttgataggttcgtagatcaattaaatatggacagtatattaaaattaaca
tcagttttaactgatataataaaagaagaaaatgctcgtcttatatcgcccgaaaaaagt
tcacttggtttagtactgtgtaataagtttggtatatcatgtattacaaagttaatagaa
cgtagcgaaacattatttgccacattacaagtaaacgaagcaatggaacagtatcatcaa
tggtatcattttttatcattaatatcaaaggtcatccaaagtgttgaactcaaaatggat
atgccaatgcaaccattagagaattgtgttatggaaacacatttaaaacgttcacgaatt
attgcaccagatcaatattctatatttttaaacgtgttttgtattaaacatactgcttag
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