Chrysoperla carnea: 123298612
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Entry
123298612 CDS
T09255
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn04136
Autophagy - other
ccrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123298612
04136 Autophagy - other
123298612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccrn04131
]
123298612
03029 Mitochondrial biogenesis [BR:
ccrn03029
]
123298612
Membrane trafficking [BR:
ccrn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123298612
Others
Specific organelles associated proteins
Auto phagosome
123298612
Mitochondrial biogenesis [BR:
ccrn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123298612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
ATG16
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
eIF2A
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD40_like
Ge1_WD40
Beta-prop_DCAF12
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_VPS8
HOOK
Motif
Other DBs
NCBI-GeneID:
123298612
NCBI-ProteinID:
XP_044736632
LinkDB
All DBs
Position
4:complement(73701230..74489873)
Genome browser
AA seq
568 aa
AA seq
DB search
MAGDDSWRNNIFNQLQERNRQQAHCFQDLILLHNKIFENANTLKYENIQLSIQNEKLRLS
GGTAGNGSTGDAEKIQHLEQKLLAQQEELTELHRRKGENSQQIIDLNIKLQEKEKQLQAR
EVSLADSKTINMSLKAEINMLTNNIRELEQLNQVLRDEHQALQLAFASLEEKLRNSQDEN
RQLLERLIRYKAKDADKMNEENENFVNEGATSPTAFLIQTLGIFGKRQQKMQKELEEAAK
DTRNISPDRPLQEGGTSFTILPTKISSVFDAHDGEVNAVQWSPVDRLLATGGADRKVKLW
NVSKGGSHESKGVLEGSNAAVTSVDFDSTGSYVLGASNDMASRVWTVSDQRLKHTLTGHS
GKVMAAKFLGEPTKVVSGSHDRTLKIWDLRNRSLVNTKFAGSCCNDLVISDSAGSTIISG
HFDKKIRFWDIRTPNCINDVALQGKVTSLDLSRDANYLLSCVRDDTLKLLDLRKHQIIGT
FYSDGFKVGCDYTRAAFSPDGQYVACGSADGSVYIWNVTTKKEEVVLKDHGSSGVFFRSA
VTAVAWNPYGTYLASVDRTKRAIIWGDV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgatgattcttggagaaataatatatttaatcaattgcaagagcgaaatcgt
caacaagcgcactgtttccaagatttaattttattacacaataaaatatttgaaaatgcg
aatacgttaaaatatgaaaatattcaattatcaatacaaaatgaaaaattacgattatcg
ggcggaaccgcgggaaacggatcgacaggagatgcagagaaaattcaacatttagaacaa
aaattattagctcaacaagaagaattgactgagttacatcgacgtaaaggtgaaaattct
caacaaattatcgatttaaacattaaactacaagaaaaggaaaaacagctacaggcgcgt
gaagttagtttagcggatagtaaaactattaacatgtctttaaaggctgaaataaatatg
ttaacaaataatatacgagaattagaacaattaaatcaagtgttgcgtgatgaacatcaa
gcgttacaattagcatttgcttcattggaagagaagttacgaaattcacaagatgaaaat
cgacagttattggagcgattaatacgttacaaagcaaaagatgcggataaaatgaatgaa
gaaaatgaaaattttgtcaatgagggtgctacaagtcctacagcttttttgatccagaca
cttggtatttttggaaaacgtcaacaaaaaatgcaaaaagaattagaagaagctgcaaaa
gatacacgaaatatatcacctgatcgaccgttacaagagggtggtacatcgtttaccata
ttaccaacgaaaatatcgtctgtgttcgatgcacacgacggggaagtgaatgctgtacaa
tggagtcctgtcgaccgtttattagcgactggtggtgctgatcggaaggttaaattatgg
aatgtttcgaaaggtggatcacatgaaagtaagggtgttttagaaggaagtaatgccgct
gtaacatcagtggattttgattctacgggatcgtatgttttgggtgcttcaaatgatatg
gcaagcagagtctggacggtttctgatcaacgattaaagcacacattaactggtcactca
gggaaggttatggcagccaaatttttgggtgaaccaaccaaagttgtatctggaagtcat
gatcgtacattaaaaatatgggatttgcgtaatagaagtttggtaaatacgaaatttgct
ggatcatgttgtaatgatctagtaatctcagattcagcgggttcaacaatcattagtgga
cattttgataagaaaatacgtttttgggacattcgaacaccaaattgtatcaacgatgtt
gcacttcaaggaaaagttacctcattagatctttctcgcgatgccaattacttattaagc
tgtgttcgagatgatacactaaagttattggatttacgaaaacatcaaattattggaaca
ttttattctgatggtttcaaagtaggctgtgattatacacgagctgcatttagcccggat
ggacaatacgttgcatgtggatcggctgatggaagtgtatacatatggaatgttacaaca
aagaaggaagaagtagtactcaaagatcacggatcctctggcgtattcttcaggtcagcg
gtaacggctgttgcatggaatccatatggcacatatctagcatctgtagatcgtaccaaa
cgtgccattatttggggtgatgtatag
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