Chrysoperla carnea: 123299069
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Entry
123299069 CDS
T09255
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123299069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrn03041
]
123299069
03009 Ribosome biogenesis [BR:
ccrn03009
]
123299069
Enzymes [BR:
ccrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123299069
Spliceosome [BR:
ccrn03041
]
Complex A
U1 snRNP components
U1 related factors
123299069
Complex B
123299069
Ribosome biogenesis [BR:
ccrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
123299069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
123299069
NCBI-ProteinID:
XP_044737160
LinkDB
All DBs
Position
4:complement(33462328..33474751)
Genome browser
AA seq
807 aa
AA seq
DB search
MRMGRSGRRSRSRDRRRSRSRDRGYGSGGSGRRNNNSGGLRKPRWDLNRLESFKKDFYVP
HENVSKRSIHEIEEWRASKEITLKGKSIPYPVFSFEEAGFPDYVMDEIQRMGFEDPTAIQ
AQGWPIALSGRDMVGIASTGSGKTLSYTLPAIVHINNQPRLQRGDGPIVLILAPTRELAQ
QIQQVANEFGRSSQIRNTCVFGGAPKGPQANDLMDGVEIVIATPGRLIDFLETGRTNLKR
CTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTCMWSATWPKEVQSLASEFLKDYIQIN
VGSLQLAANHNILQIIDVCQEYEKETKLSTLLKEIMAEQENKTIIFIETKRRVDDITRKM
KRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDVEDVKFVINFDYPSN
SEDYVHRIGRTGRSQRTGTAYTFFTPSNANKAADLVAVLKEAKQVINPKLQEMAESRNNG
WGNSSGGRGRNRWRGNRVIRNHSDSRSRSRSRDRDRERDRDRDRRRRSRTRSRSRDRRRN
GSNRLRSRTPPSPRSSRSSKSQQTNTQQVSAPPAGGISGGTPASHASNGNTGSHGQQQQQ
QQQEPPPPQRNTPLPPTHTGPPPPPPPAQQQAHYPNNNQNTYSNVSKYSCPPGPAPPPLP
PPNPVHHLPPPQQPPPPQPQQIAHHIQRPPPPIAMPNLSVPPPPTPQSMAAAAHHHQQQQ
QHHHHQMMAAQNVYHHPHHPHHPHQMHQQPPPPFHQGMMMQPPPPPPPQMNSAPTMYYNP
PPPPPPASAGPAGGGCWLPPPPPPHTR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgggtcgatcaggaaggagatctcgtagtcgagatcgcagacgatcacgaagt
cgtgaccgtggctatggcagcggtggaagtggacgtcgcaacaacaacagtggagggtta
cgtaaaccaagatgggatctaaatcgtctcgaatcatttaaaaaagatttttatgtacca
catgaaaatgtttccaaacgatccattcacgaaattgaagaatggcgtgcttcgaaagag
ataactctgaaaggaaaaagtattccgtatccagtatttagttttgaagaagctggtttt
cctgattatgttatggacgaaattcaacgaatgggatttgaagatccaacagctattcaa
gcgcaaggttggccgattgcattatcaggacgtgatatggttggaattgcatcgaccgga
tcaggaaaaactttatcttatacattgccagcgattgtccacattaataatcaaccacga
ttgcaacgtggagatggaccaattgtgttaatattagcacccacacgtgagttggctcaa
caaattcaacaagttgccaacgaatttggacgatcgtctcaaattcgaaacacttgtgtt
ttcggtggagctcccaagggaccacaagccaatgatctaatggatggtgttgaaattgta
atagcaacacctgggcgattaattgactttttagaaacaggaaggacaaatttaaaacgt
tgtacatatttagtacttgacgaagctgatcgtatgttagatatgggttttgaaccacaa
atacgtaaaattattgaacaaatccgtccagatcgacaaacttgtatgtggtcagcgaca
tggccaaaagaagtacaaagtttggcatcggaatttttaaaagattatatacagatcaat
gttggttcattacaactagcagcaaatcataatattttacaaataattgacgtgtgccaa
gagtatgaaaaagagactaaattaagcacgcttttaaaagaaattatggctgaacaagag
aataagactattatttttattgagactaaacgacgtgttgatgatattacacggaaaatg
aaacgtgatgggtggcctgcggtttgtatacacggtgataaaactcaacaagaacgagat
tgggtattacaagattttcgctcagggaaagctccaattttggtagctacagatgtagca
gctcgcggtttagatgtggaagatgtgaaatttgtgataaattttgattatccgtcaaat
tcagaagattatgtacatcgtataggacgtaccgggcgatcacaacgtaccggaacagcg
tatacattttttacgcctagtaatgcaaacaaagcagctgatttagtggctgttttaaaa
gaggcaaaacaagtgattaatccaaaattacaagaaatggctgaaagtcgtaataatgga
tggggaaattctagcggcggaagaggaagaaatcgttggcgtggaaatcgtgtaattcga
aaccatagtgattcacgtagtcgctctagatcacgtgaccgagatcgtgaacgtgacaga
gatcgtgatcgtagacgacgtagtcgtacccgatcacgtagtcgagatcgtcgaagaaat
ggtagcaatagattacgttctcgaacacctccctcaccacgttcatcccgttcaagtaaa
tctcaacaaactaatacacaacaggtttcagcaccaccagccggtggtattagtggtggt
acacctgcgtcacacgccagtaatgggaatactggatcacatggacaacagcagcaacaa
cagcaacaagagccaccaccaccacagcgtaatacaccattacctccaacacatactggg
ccaccaccacccccaccaccagctcaacaacaggctcattatccgaataataatcaaaat
acgtactcgaatgtttcaaaatattcatgcccaccaggtccagcacccccaccattacca
cccccgaatcctgtacaccatttaccaccacctcaacaacctccaccgccacaaccacag
caaatcgctcatcatattcagaggccaccaccaccgatagcgatgcctaatctaagtgta
ccaccaccacctactccacagagtatggcagcagccgcacatcatcatcagcaacagcaa
caacatcatcatcatcaaatgatggctgctcaaaatgtttaccatcatccacatcatccg
catcacccccaccaaatgcatcaacagccaccacccccgtttcatcagggtatgatgatg
caaccacctccgccaccgcccccgcaaatgaattcggcaccaacaatgtattataatcca
ccaccaccgccacccccagcatctgcaggacctgctggtggtggatgctggttgccacca
ccaccgccgccacatactcgttga
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